Long Noncoding RNA MAGI2-AS3 Represses Cell Progression in Clear Cell Renal Cell Carcinoma by Modulating the miR-629-5p/PRDM16 Axis.

IF 1.5 4区 医学 Q4 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Critical Reviews in Eukaryotic Gene Expression Pub Date : 2023-01-01 DOI:10.1615/CritRevEukaryotGeneExpr.2023048338
Chengquan Yan, Pengfei Wang, Chaofei Zhao, Guangwei Yin, Xin Meng, Lin Li, Shengyong Cai, Bin Meng
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Abstract

The objective of this study was to determine the regulatory mechanism of MAGI2-AS3 in clear cell renal cell carcinoma (ccRCC), thereby supplying a new insight for ccRCC treatment. Expression data in TCGA-KIRC were obtained. Target gene lncRNA for research was determined using expression analysis and clinical analysis. lncRNA's downstream regulatory miRNA and mRNA were predicted by bioinformatics databases. ccRCC cell malignant phenotypes were detected via CCK-8, colony formation, Transwell migration, and invasion assays. The targeting relationship between genes was assessed through dual-luciferase reporter gene analysis. Kaplan-Meier (K-M) analysis was carried out to verify the effect of MAGI2-AS3, miR-629-5p, and PRDM16 on the survival rate of ccRCC patients. MAGI2-AS3 expression in ccRCC tissue and cells was shown to be markedly decreased and its expression to continuously decline with tumor progression. MAGI2-AS3 suppresses ccRCC proliferation and migration. Dual-luciferase assay showed that MAGI2-AS3 binds miR-629-5p and that miR-629-5p binds PRDM16. In addition, functional experiments showed that MAGI2-AS3 facilitates PRDM16 expression by repressing miR-629-5p expression, thereby suppressing ccRCC cell aggression. K-M analysis showed that upregulation of either MAGI2-AS3 or PRDM16 significantly improves ccRCC patient survival, while upregulation of miR-629-5p has no significant impact. MAGI2-AS3 sponges miR-629-5p to modulate PRDM16 to mediate ccRCC development. Meanwhile, the MAGI2-AS3/miR-629-5p/PRDM16 axis, as a regulatory pathway of ccRCC progression, may be a possible therapeutic target and prognostic indicator of ccRCC.

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长链非编码RNA MAGI2-AS3通过调节miR-629-5p/PRDM16轴抑制透明细胞肾细胞癌的细胞进展。
本研究的目的是确定MAGI2-AS3在透明细胞肾细胞癌(ccRCC)中的调控机制,从而为ccRCC的治疗提供新的见解。获得TCGA-KIRC的表达数据。通过表达分析和临床分析确定研究的靶基因lncRNA。通过生物信息学数据库预测lncRNA的下游调控miRNA和mRNA。通过CCK-8、集落形成、Transwell迁移和侵袭试验检测ccRCC细胞的恶性表型。通过双荧光素酶报告基因分析评估基因间的靶向关系。通过Kaplan-Meier (K-M)分析验证MAGI2-AS3、miR-629-5p和PRDM16对ccRCC患者生存率的影响。MAGI2-AS3在ccRCC组织和细胞中的表达明显降低,并随着肿瘤的进展而持续下降。MAGI2-AS3抑制ccRCC的增殖和迁移。双荧光素酶测定显示,MAGI2-AS3结合miR-629-5p, miR-629-5p结合PRDM16。此外,功能实验表明,MAGI2-AS3通过抑制miR-629-5p的表达促进PRDM16的表达,从而抑制ccRCC细胞的侵袭性。K-M分析显示,上调MAGI2-AS3或PRDM16均可显著提高ccRCC患者的生存率,而上调miR-629-5p则无显著影响。MAGI2-AS3通过miR-629-5p调控PRDM16介导ccRCC的发展。同时,MAGI2-AS3/miR-629-5p/PRDM16轴作为ccRCC进展的调控通路,可能是ccRCC可能的治疗靶点和预后指标。
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来源期刊
Critical Reviews in Eukaryotic Gene Expression
Critical Reviews in Eukaryotic Gene Expression 生物-生物工程与应用微生物
CiteScore
2.70
自引率
0.00%
发文量
67
审稿时长
1 months
期刊介绍: Critical ReviewsTM in Eukaryotic Gene Expression presents timely concepts and experimental approaches that are contributing to rapid advances in our mechanistic understanding of gene regulation, organization, and structure within the contexts of biological control and the diagnosis/treatment of disease. The journal provides in-depth critical reviews, on well-defined topics of immediate interest, written by recognized specialists in the field. Extensive literature citations provide a comprehensive information resource. Reviews are developed from an historical perspective and suggest directions that can be anticipated. Strengths as well as limitations of methodologies and experimental strategies are considered.
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