Downregulated miR-150-5p in the Tissue of Nasopharyngeal Carcinoma.

IF 1.4 4区 生物学 Q4 GENETICS & HEREDITY Genetics research Pub Date : 2022-01-01 DOI:10.1155/2022/2485055
Jia-Ying Wen, Gang Chen, Jian-Di Li, Jia-Yuan Luo, Juan He, Ren-Sheng Wang, Li-Ting Qin
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引用次数: 1

Abstract

The clinical significance and potential targets of miR-150-5p have not been elucidated in nasopharyngeal carcinoma (NPC). The pooled analysis based on 539 NPC samples and 75 non-NPC nasopharyngeal samples demonstrated that the expression of miR-150-5p was down-regulated in NPC, with the area under the curve being 0.89 and the standardized mean difference being -0.66. Subsequently, we further screened the differentially expressed genes (DEGs) of 14 datasets, including 312 NPC samples and 70 non-NPC nasopharyngeal samples. After the DEGs were narrowed down with the predicted targets from the miRWalk database, 1316 prospective target genes of miR-150-5p were identified. The enrichment analysis suggested that "pathways in cancer" was the most significant pathway. Finally, six hub genes of "pathways in cancer", including EGFR, TP53, HRAS, CCND1, CDH1, and FGF2, were screened out through the STRING database. In conclusion, the down-regulation of miR-150-5p modulates the tumorigenesis and progression of NPC.

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miR-150-5p在鼻咽癌组织中的下调
miR-150-5p在鼻咽癌(NPC)中的临床意义和潜在靶点尚未阐明。539例鼻咽癌样本和75例非鼻咽癌样本的汇总分析显示,miR-150-5p在鼻咽癌中表达下调,曲线下面积为0.89,标准化平均差为-0.66。随后,我们进一步筛选了14个数据集的差异表达基因(DEGs),其中包括312个NPC样本和70个非NPC鼻咽样本。在用miRWalk数据库中的预测靶标缩小deg范围后,鉴定出miR-150-5p的1316个预期靶基因。富集分析表明,“癌症途径”是最显著的途径。最后,通过STRING数据库筛选出EGFR、TP53、HRAS、CCND1、CDH1、FGF2等6个“癌症通路”枢纽基因。综上所述,miR-150-5p的下调调节了鼻咽癌的发生和发展。
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来源期刊
Genetics research
Genetics research 生物-遗传学
自引率
6.70%
发文量
74
审稿时长
>12 weeks
期刊介绍: Genetics Research is a key forum for original research on all aspects of human and animal genetics, reporting key findings on genomes, genes, mutations and molecular interactions, extending out to developmental, evolutionary, and population genetics as well as ethical, legal and social aspects. Our aim is to lead to a better understanding of genetic processes in health and disease. The journal focuses on the use of new technologies, such as next generation sequencing together with bioinformatics analysis, to produce increasingly detailed views of how genes function in tissues and how these genes perform, individually or collectively, in normal development and disease aetiology. The journal publishes original work, review articles, short papers, computational studies, and novel methods and techniques in research covering humans and well-established genetic organisms. Key subject areas include medical genetics, genomics, human evolutionary and population genetics, bioinformatics, genetics of complex traits, molecular and developmental genetics, Evo-Devo, quantitative and statistical genetics, behavioural genetics and environmental genetics. The breadth and quality of research make the journal an invaluable resource for medical geneticists, molecular biologists, bioinformaticians and researchers involved in genetic basis of diseases, evolutionary and developmental studies.
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