Efficient biosynthesis of (R)-mandelic acid from styrene oxide by an adaptive evolutionary Gluconobacter oxydans STA.

Fei Liu, Junping Zhou, Mengkai Hu, Yan Chen, Jin Han, Xuewei Pan, Jiajia You, Meijuan Xu, Taowei Yang, Minglong Shao, Xian Zhang, Zhiming Rao
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Abstract

Background: (R)-mandelic acid (R-MA) is a highly valuable hydroxyl acid in the pharmaceutical industry. However, biosynthesis of optically pure R-MA remains significant challenges, including the lack of suitable catalysts and high toxicity to host strains. Adaptive laboratory evolution (ALE) was a promising and powerful strategy to obtain specially evolved strains.

Results: Herein, we report a new cell factory of the Gluconobacter oxydans to biocatalytic styrene oxide into R-MA by utilizing the G. oxydans endogenous efficiently incomplete oxidization and the epoxide hydrolase (SpEH) heterologous expressed in G. oxydans. With a new screened strong endogenous promoter P12780, the production of R-MA was improved to 10.26 g/L compared to 7.36 g/L of using Plac. As R-MA showed great inhibition for the reaction and toxicity to cell growth, adaptive laboratory evolution (ALE) strategy was introduced to improve the cellular R-MA tolerance. The adapted strain that can tolerate 6 g/L R-MA was isolated (named G. oxydans STA), while the wild-type strain cannot grow under this stress. The conversion rate was increased from 0.366 g/L/h of wild type to 0.703 g/L/h by the recombinant STA, and the final R-MA titer reached 14.06 g/L. Whole-genome sequencing revealed multiple gene-mutations in STA, in combination with transcriptome analysis under R-MA stress condition, we identified five critical genes that were associated with R-MA tolerance, among which AcrA overexpression could further improve R-MA titer to 15.70 g/L, the highest titer reported from bulk styrene oxide substrate.

Conclusions: The microbial engineering with systematic combination of static regulation, ALE, and transcriptome analysis strategy provides valuable solutions for high-efficient chemical biosynthesis, and our evolved G. oxydans would be better to serve as a chassis cell for hydroxyl acid production.

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适应性进化的 Gluconobacter oxydans STA 从氧化苯乙烯高效生物合成 (R)-mandelic acid。
背景:(R)-扁桃酸(R-MA)是制药业中一种极具价值的羟基酸。然而,光学纯度的 R-MA 的生物合成仍然面临重大挑战,包括缺乏合适的催化剂和对宿主菌株的高毒性。自适应实验室进化(ALE)是获得特殊进化菌株的一种有前途的有力策略:在此,我们报告了一种新的氧单胞菌细胞工厂,它利用氧单胞菌内源的高效不完全氧化作用和氧单胞菌异源表达的环氧化物水解酶(SpEH),将氧化苯乙烯生物催化成 R-MA。利用新筛选出的强内源启动子 P12780,R-MA 的产量从使用 Plac 时的 7.36 克/升提高到 10.26 克/升。由于 R-MA 对反应有很大的抑制作用,而且对细胞生长有毒性,因此引入了实验室适应性进化(ALE)策略来提高细胞对 R-MA 的耐受性。分离出了能耐受 6 g/L R-MA 的适应菌株(命名为 G. oxydans STA),而野生型菌株在这种压力下无法生长。重组 STA 的转化率从野生型的 0.366 g/L/h 提高到 0.703 g/L/h,最终 R-MA 滴度达到 14.06 g/L。全基因组测序发现了 STA 中的多个基因突变,结合 R-MA 胁迫条件下的转录组分析,我们确定了五个与 R-MA 耐受性相关的关键基因,其中 AcrA 的过表达可进一步提高 R-MA 滴度,使其达到 15.70 g/L,这是目前报道的来自大块氧化苯乙烯底物的最高滴度:结合静态调控、ALE 和转录组分析策略的微生物工程为高效化学生物合成提供了有价值的解决方案,我们进化的 G. oxydans 更适合作为羟基酸生产的底盘细胞。
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