A Mixed Model for Assessing the Effect of Numerous Plant Species Interactions on Grassland Biodiversity and Ecosystem Function Relationships.

Jack McDonnell, Thomas McKenna, Kathryn A Yurkonis, Deirdre Hennessy, Rafael de Andrade Moral, Caroline Brophy
{"title":"A Mixed Model for Assessing the Effect of Numerous Plant Species Interactions on Grassland Biodiversity and Ecosystem Function Relationships.","authors":"Jack McDonnell,&nbsp;Thomas McKenna,&nbsp;Kathryn A Yurkonis,&nbsp;Deirdre Hennessy,&nbsp;Rafael de Andrade Moral,&nbsp;Caroline Brophy","doi":"10.1007/s13253-022-00505-2","DOIUrl":null,"url":null,"abstract":"<p><p>In grassland ecosystems, it is well known that increasing plant species diversity can improve ecosystem functions (i.e., ecosystem responses), for example, by increasing productivity and reducing weed invasion. Diversity-Interactions models use species proportions and their interactions as predictors in a regression framework to assess biodiversity and ecosystem function relationships. However, it can be difficult to model numerous interactions if there are many species, and interactions may be temporally variable or dependent on spatial planting patterns. We developed a new Diversity-Interactions mixed model for jointly assessing many species interactions and within-plot species planting pattern over multiple years. We model pairwise interactions using a small number of fixed parameters that incorporate spatial effects and supplement this by including all pairwise interaction variables as random effects, each constrained to have the same variance within each year. The random effects are indexed by pairs of species within plots rather than a plot-level factor as is typical in mixed models, and capture remaining variation due to pairwise species interactions parsimoniously. We apply our novel methodology to three years of weed invasion data from a 16-species grassland experiment that manipulated plant species diversity and spatial planting pattern and test its statistical properties in a simulation study.Supplementary materials accompanying this paper appear online. Supplementary materials for this article are available at 10.1007/s13253-022-00505-2.</p>","PeriodicalId":56336,"journal":{"name":"Journal of Agricultural Biological and Environmental Statistics","volume":null,"pages":null},"PeriodicalIF":1.4000,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9908731/pdf/","citationCount":"2","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Agricultural Biological and Environmental Statistics","FirstCategoryId":"100","ListUrlMain":"https://doi.org/10.1007/s13253-022-00505-2","RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"BIOLOGY","Score":null,"Total":0}
引用次数: 2

Abstract

In grassland ecosystems, it is well known that increasing plant species diversity can improve ecosystem functions (i.e., ecosystem responses), for example, by increasing productivity and reducing weed invasion. Diversity-Interactions models use species proportions and their interactions as predictors in a regression framework to assess biodiversity and ecosystem function relationships. However, it can be difficult to model numerous interactions if there are many species, and interactions may be temporally variable or dependent on spatial planting patterns. We developed a new Diversity-Interactions mixed model for jointly assessing many species interactions and within-plot species planting pattern over multiple years. We model pairwise interactions using a small number of fixed parameters that incorporate spatial effects and supplement this by including all pairwise interaction variables as random effects, each constrained to have the same variance within each year. The random effects are indexed by pairs of species within plots rather than a plot-level factor as is typical in mixed models, and capture remaining variation due to pairwise species interactions parsimoniously. We apply our novel methodology to three years of weed invasion data from a 16-species grassland experiment that manipulated plant species diversity and spatial planting pattern and test its statistical properties in a simulation study.Supplementary materials accompanying this paper appear online. Supplementary materials for this article are available at 10.1007/s13253-022-00505-2.

Abstract Image

Abstract Image

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
多种植物相互作用对草地生物多样性和生态系统功能关系影响的混合模型
在草地生态系统中,众所周知,增加植物物种多样性可以改善生态系统功能(即生态系统响应),例如通过提高生产力和减少杂草入侵。多样性-相互作用模型在回归框架中使用物种比例及其相互作用作为预测因子来评估生物多样性和生态系统功能之间的关系。然而,如果存在许多物种,则很难建立大量相互作用的模型,并且相互作用可能在时间上是可变的或依赖于空间种植模式。我们建立了一个新的多样性-相互作用混合模型,用于联合评估多种物种相互作用和样地内物种种植模式。我们使用包含空间效应的少量固定参数对两两相互作用进行建模,并通过将所有两两相互作用变量作为随机效应进行补充,每个变量在每年都有相同的方差。随机效应以样地内的物种对为索引,而不是像混合模型那样以样地水平因子为索引,并且可以简洁地捕获由于成对物种相互作用而产生的剩余变化。本文采用该方法对16种草地的3年杂草入侵数据进行了模拟研究,并对其统计特性进行了检验。本文附带的补充资料出现在网上。本文的补充资料请参见10.1007/s13253-022-00505-2。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
CiteScore
2.70
自引率
7.10%
发文量
38
审稿时长
>12 weeks
期刊介绍: The Journal of Agricultural, Biological and Environmental Statistics (JABES) publishes papers that introduce new statistical methods to solve practical problems in the agricultural sciences, the biological sciences (including biotechnology), and the environmental sciences (including those dealing with natural resources). Papers that apply existing methods in a novel context are also encouraged. Interdisciplinary papers and papers that illustrate the application of new and important statistical methods using real data are strongly encouraged. The journal does not normally publish papers that have a primary focus on human genetics, human health, or medical statistics.
期刊最新文献
Algorithms for Fitting the Space-Time ETAS Model to Earthquake Catalog Data: A Comparative Study Bayesian Approaches to Proxy Uncertainty Quantification in Paleoecology: A Mathematical Justification and Practical Integration Stopping Rule Sampling to Monitor and Protect Endangered Species Environmental Loss Assessment via Functional Outlier Detection of Transformed Biodiversity Profiles Expectations of Linear and Nonlinear Hawkes Processes Using a Field-Theoretical Approach
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1