Evolutionary Approach to Biological Homochirality.

IF 1.9 4区 物理与天体物理 Q2 BIOLOGY Origins of Life and Evolution of Biospheres Pub Date : 2022-12-01 DOI:10.1007/s11084-022-09632-9
Konstantin K Konstantinov, Alisa F Konstantinova
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Abstract

We study a very simple linear evolutionary model based on distribution of protocells by total enantiomeric excess and without any mutual inhibition and show that such model can produce two species with values of total enantiomeric excess in each of the species approaching [Formula: see text] when there is a global [Formula: see text] symmetry. We then consider a scenario when there is a small external global asymmetry factor, like weak interaction, and show that only one of the species remains in such a case, and that is the one, which is more efficient in replication. We perform an estimate of the time necessary to reach homochirality in such a model and show that reasonable assumptions lead to an estimate of around 300 thousand years plus or minus a couple of orders of magnitude. Despite this seemingly large time to reach homochirality, the model is immune to racemization because amino acids in the model follow the lifespan of the protocells rather than the time needed to reach homochirality. We show that not needing mutual inhibition in such evolutionary model is due to the difference in the topology of the spaces in which considered model and many known models of biological homochirality operate. Bifurcation-based models operate in disconnected zero-dimensional space (the space is just two points with enantiomeric excess equal [Formula: see text] and [Formula: see text]), whereas considered evolutionary model (in its continuous representation) operates in one-dimensional connected space, that is the whole interval between [Formula: see text] and [Formula: see text] of total enantiomeric excess. We then proceed with the analysis of the replication process in non-homochiral environment and show that replication errors (the probability to attach an amino acid of wrong chirality) result in a smooth decrease of replication time when total enantiomeric excess of the replicated structure moves away from zero. We show that this decrease in replication time is sufficient for considered model to work.

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生物同手性的进化方法。
我们研究了一个非常简单的线性进化模型,该模型基于原始细胞的总对映体过量分布,没有任何相互抑制,并表明当存在全局对称性时,这种模型可以产生两个物种,每个物种的总对映体过量值接近[公式:见文本]。然后,我们考虑一种情况,当存在一个小的外部全局不对称因素,如弱相互作用,并表明只有一个物种在这种情况下仍然存在,这是一个更有效的复制。我们对在这样一个模型中达到同手性所需的时间进行了估计,并表明合理的假设导致大约30万年正负两个数量级的估计。尽管达到同手性似乎需要很长的时间,但该模型不受外消旋作用的影响,因为模型中的氨基酸遵循原细胞的寿命,而不是达到同手性所需的时间。我们表明,在这种进化模型中不需要相互抑制是由于所考虑的模型和许多已知的生物同手性模型所处空间的拓扑结构不同。基于分岔的模型在不相连的零维空间中运行(空间只是两个点,对映体过量等于[公式:见文]和[公式:见文]),而考虑的进化模型(在其连续表示中)在一维连通空间中运行,即总对映体过量[公式:见文]和[公式:见文]之间的整个间隔。然后,我们继续分析非同手性环境下的复制过程,并表明当复制结构的总对映体过量远离零时,复制错误(附着错误手性氨基酸的概率)会导致复制时间的平稳减少。我们表明,复制时间的减少足以使所考虑的模型工作。
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来源期刊
CiteScore
3.20
自引率
15.00%
发文量
12
审稿时长
>12 weeks
期刊介绍: The subject of the origin and early evolution of life is an inseparable part of the general discipline of Astrobiology. The journal Origins of Life and Evolution of Biospheres places special importance on the interconnection as well as the interdisciplinary nature of these fields, as is reflected in its subject coverage. While any scientific study which contributes to our understanding of the origins, evolution and distribution of life in the Universe is suitable for inclusion in the journal, some examples of important areas of interest are: prebiotic chemistry and the nature of Earth''s early environment, self-replicating and self-organizing systems, the theory of the RNA world and of other possible precursor systems, and the problem of the origin of the genetic code. Early evolution of life - as revealed by such techniques as the elucidation of biochemical pathways, molecular phylogeny, the study of Precambrian sediments and fossils and of major innovations in microbial evolution - forms a second focus. As a larger and more general context for these areas, Astrobiology refers to the origin and evolution of life in a cosmic setting, and includes interstellar chemistry, planetary atmospheres and habitable zones, the organic chemistry of comets, meteorites, asteroids and other small bodies, biological adaptation to extreme environments, life detection and related areas. Experimental papers, theoretical articles and authorative literature reviews are all appropriate forms for submission to the journal. In the coming years, Astrobiology will play an even greater role in defining the journal''s coverage and keeping Origins of Life and Evolution of Biospheres well-placed in this growing interdisciplinary field.
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