Genotype-Phenotype Correlation Reanalysis in 83 Chinese Cases with OCRL Mutations.

IF 1.4 4区 生物学 Q4 GENETICS & HEREDITY Genetics research Pub Date : 2022-01-01 DOI:10.1155/2022/1473260
Lingxia Zhang, Shugang Wang, Ruoque Mao, Haidong Fu, Jingjing Wang, Huijun Shen, Zhihong Lu, Junyi Chen, Yu Bao, Chunyue Feng, En Yin Lai, Qing Ye, Jianhua Mao
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引用次数: 1

Abstract

Background: Both Lowe syndrome and Dent-2 disease are caused by variants in the OCRL gene. However, the reason why patients with similar OCRL gene mutations presented with different phenotypes remains uncertain.

Methods: Children with hemizygous pathogenic or likely pathogenic variants in OCRL were compiled from published and unpublished consecutive cases from China. Furthermore, a Chi-square test was employed to analyze the correlation of the location and types of mutations on the phenotype of children with Lowe syndrome or Dent-2 disease.

Results: Among the total 83 patients, 70.8% (34/48) cases of Lowe syndrome presented with truncating mutations, while only 31.4% (11/35) cases of Dent-2 disease presented with truncating mutation (Χ2 = 12.662; P < 0.001). Meanwhile, the majority of mutations in Dent-2 disease are located in Exon 2-12 (21/35, 60.0%), while the majority of mutations in Lowe syndrome are located in Exon 13-23 (39/48, 81.3%; Χ2 = 14.922; P < 0.001).

Conclusions: Truncating mutations of the OCRL gene were more common in patients with Lowe syndrome than in Dent-2 disease, while mutation is more likely located at exon 2-12 in Dent-2 disease than that in Lowe syndrome. The type and location of mutation are important indicators for the phenotypes in patients with OCRL mutation. This is a large cohort study analyzing the genotype-phenotype correlation in patients with Lowe syndrome and Dent-2 disease in China. Our data may improve the interpretation of new OCRL variants and genetic counseling. Furthermore, a large international study would be necessary to illustrate the genotype-phenotype correlation in patients with OCRL mutations.

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83例中国ocl突变基因型-表型相关性再分析
背景:Lowe综合征和Dent-2疾病都是由ocl基因变异引起的。然而,具有相似ocl基因突变的患者出现不同表型的原因尚不清楚。方法:从中国已发表和未发表的连续病例中收集有半合子致病性或可能致病性变异的ocl患儿。此外,采用卡方检验分析突变的位置和类型与Lowe综合征或Dent-2病儿童表型的相关性。结果:83例患者中,70.8%(34/48)的Lowe综合征患者出现截断突变,而31.4%(11/35)的Dent-2疾病患者出现截断突变(Χ2 = 12.662;P < 0.001)。同时,Dent-2疾病的大部分突变位于外显子2-12(21/35,60.0%),而Lowe综合征的大部分突变位于外显子13-23 (39/48,81.3%;Χ2 = 14.922;P < 0.001)。结论:ocl基因的截断突变在Lowe综合征患者中比在Dent-2疾病中更常见,而突变在Dent-2疾病中比在Lowe综合征中更可能位于外显子2-12。突变的类型和位置是ocl突变患者表型的重要指标。这是一项大型队列研究,分析了中国Lowe综合征和Dent-2疾病患者的基因型-表型相关性。我们的数据可能会改善新的ocl变异的解释和遗传咨询。此外,有必要进行大规模的国际研究来阐明ocl突变患者的基因型-表型相关性。
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来源期刊
Genetics research
Genetics research 生物-遗传学
自引率
6.70%
发文量
74
审稿时长
>12 weeks
期刊介绍: Genetics Research is a key forum for original research on all aspects of human and animal genetics, reporting key findings on genomes, genes, mutations and molecular interactions, extending out to developmental, evolutionary, and population genetics as well as ethical, legal and social aspects. Our aim is to lead to a better understanding of genetic processes in health and disease. The journal focuses on the use of new technologies, such as next generation sequencing together with bioinformatics analysis, to produce increasingly detailed views of how genes function in tissues and how these genes perform, individually or collectively, in normal development and disease aetiology. The journal publishes original work, review articles, short papers, computational studies, and novel methods and techniques in research covering humans and well-established genetic organisms. Key subject areas include medical genetics, genomics, human evolutionary and population genetics, bioinformatics, genetics of complex traits, molecular and developmental genetics, Evo-Devo, quantitative and statistical genetics, behavioural genetics and environmental genetics. The breadth and quality of research make the journal an invaluable resource for medical geneticists, molecular biologists, bioinformaticians and researchers involved in genetic basis of diseases, evolutionary and developmental studies.
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