Circulating MicroRNA Profiling Identifies Distinct MicroRNA Signatures in Acute Ischemic Stroke and Transient Ischemic Attack Patients.

IF 4.9 2区 生物学 International Journal of Molecular Sciences Pub Date : 2022-12-21 DOI:10.3390/ijms24010108
Salman M Toor, Eman K Aldous, Aijaz Parray, Naveed Akhtar, Yasser Al-Sarraj, Essam M Abdelalim, Abdelilah Arredouani, Omar El-Agnaf, Paul J Thornalley, Sajitha V Pananchikkal, Ghulam Jeelani Pir, Raheem Ayadathil, Ashfaq Shuaib, Nehad M Alajez, Omar M E Albagha
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引用次数: 5

Abstract

Transient ischemic attack (TIA) refers to a momentary neurologic deficit caused by focal cerebral, spinal or retinal ischemic insult. TIA is associated with a high risk of impending acute ischemic stroke (AIS), a neurologic dysfunction characterized by focal cerebral, spinal or retinal infarction. Understanding the differences in molecular pathways in AIS and TIA has merit for deciphering the underlying cause for neuronal deficits with long-term effects and high risks of morbidity and mortality. In this study, we performed comprehensive investigations into the circulating microRNA (miRNA) profiles of AIS (n = 191) and TIA (n = 61) patients. We performed RNA-Seq on serum samples collected within 24 hrs of clinical diagnosis and randomly divided the study populations into discovery and validation cohorts. We identified a panel of 11 differentially regulated miRNAs at FDR < 0.05. Hsa-miR-548c-5p, -20a-5p, -18a-5p, -484, -652-3p, -486-3p, -24-3p, -181a-5p and -222-3p were upregulated, while hsa-miR-500a-3p and -206 were downregulated in AIS patients compared to TIA patients. We also probed the previously validated gene targets of our identified miRNA panel to highlight the molecular pathways affected in AIS. Moreover, we developed a multivariate classifier with potential utilization as a discriminative biomarker for AIS and TIA patients. The underlying molecular pathways in AIS compared to TIA may be explored further in functional studies for therapeutic targeting in clinical translation.

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循环MicroRNA谱识别急性缺血性卒中和短暂性缺血性发作患者不同的MicroRNA特征。
短暂性脑缺血发作(TIA)是指由局灶性脑、脊髓或视网膜缺血性损伤引起的短暂性神经功能缺损。TIA与即将发生的急性缺血性卒中(AIS)的高风险相关,AIS是一种以局灶性脑、脊髓或视网膜梗死为特征的神经功能障碍。了解AIS和TIA分子通路的差异有助于解释具有长期影响和高发病率和死亡率的神经元缺陷的潜在原因。在这项研究中,我们对AIS (n = 191)和TIA (n = 61)患者的循环microRNA (miRNA)谱进行了全面调查。我们对临床诊断后24小时内收集的血清样本进行了RNA-Seq检测,并将研究人群随机分为发现组和验证组。我们在FDR < 0.05时鉴定了一组11个差异调节的mirna。与TIA患者相比,AIS患者中Hsa-miR-548c-5p、-20a-5p、-18a-5p、-484、-652-3p、-486-3p、-24-3p、-181a-5p和-222-3p表达上调,而hsa-miR-500a-3p和-206表达下调。我们还探索了先前验证的miRNA小组的基因靶点,以突出AIS中受影响的分子途径。此外,我们开发了一种多变量分类器,有望作为AIS和TIA患者的鉴别生物标志物。与TIA相比,AIS的潜在分子通路可以在临床翻译的功能研究中进一步探索。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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10.70%
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13472
审稿时长
1.7 months
期刊介绍: The International Journal of Molecular Sciences (ISSN 1422-0067) provides an advanced forum for chemistry, molecular physics (chemical physics and physical chemistry) and molecular biology. It publishes research articles, reviews, communications and short notes. Our aim is to encourage scientists to publish their theoretical and experimental results in as much detail as possible. Therefore, there is no restriction on the length of the papers or the number of electronics supplementary files. For articles with computational results, the full experimental details must be provided so that the results can be reproduced. Electronic files regarding the full details of the calculation and experimental procedure, if unable to be published in a normal way, can be deposited as supplementary material (including animated pictures, videos, interactive Excel sheets, software executables and others).
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