Automate Clinical Evidence Synthesis by Linking Trials to Publications with Text Analytics

C. Li, H. Gurulingappa, P. Karmalkar, J. Raab, Aastha Vij, Gerard Megaro, C. Henke
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Abstract

Randomized clinical trials are the core data source for meta- analyses and relative efficacy analyses. As of today, there are missing links between large portions of trials registered in clinical trial registries and their reported outcomes published in scientific journals. This missing citation information makes it difficult to identify all relevant publications for evidence synthesis and decision support. Therefore, we propose a novel natural language processing-based system to establish links between clinical trials and their published outcomes in literature. Different approaches leveraging information retrieval and machine learning with embedding features were systematically developed and evaluated. Results show that shallow machine learning approach with embeddings provide promising results indicating the value it can add to circumvent the limitations of manual search and analyses.
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通过文本分析将试验与出版物联系起来,实现临床证据自动合成
随机临床试验是meta分析和相关疗效分析的核心数据来源。截至目前,在临床试验登记处注册的大部分试验与其在科学期刊上发表的报告结果之间存在缺失联系。这种缺失的引文信息使得难以识别所有相关的证据合成和决策支持出版物。因此,我们提出了一种新的基于自然语言处理的系统,以建立临床试验与其在文献中发表的结果之间的联系。系统地开发和评估了利用信息检索和具有嵌入特征的机器学习的不同方法。结果表明,带有嵌入的浅层机器学习方法提供了有希望的结果,表明它可以规避人工搜索和分析的局限性。
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