Bioinformatics analysis of Zaire Ebola virus evolution

Tanming Cui, Jingshu Zhang
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Abstract

Ebola hemorrhagic fever (EBHF), caused by Ebola virus (EBOV), is a type of fatal epidemic disease with highly pathogenic rate, highly infection rate, and highly mortality rate which has reemerged in West Africa in February, 2014, leading to a catastrophe in the local and trend of spreading worldwide. In order to prevent the disease from spreading further, it is necessary to have a research of the most dangerous Zaire Ebola virus at the molecular level. Comparing to Zaire EBOV in 1976, the evolution result of the virus in 2014 can instruct people to take steps and have the proper precaution program. The comparison and phylogenic tree methods are able to reveal the degree of the evolution whose processing is conservative at present. With the help of ClustalX, the amount of mutations in different parts of Zaire EBOV nucleotide sequences can be analyzed. Only 3% bases changed in the sequences of 2014. Phylogenic tree can reflect the relationship of the sequences in diverse years, and they are homology. Combining the changes of base with corresponding amino acid, the conservation of the virus can be demonstrated again. It's significant to have a continuous concern of the Zaire virus, as it may have potential evolution.
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扎伊尔埃博拉病毒进化的生物信息学分析
埃博拉出血热(EBHF)是由埃博拉病毒(EBOV)引起的一种高致病性、高感染率、高死亡率的致命流行病,于2014年2月在西非重新出现,造成了当地的灾难和全球蔓延的趋势。为了防止疾病进一步传播,有必要在分子水平上对最危险的扎伊尔埃博拉病毒进行研究。与1976年扎伊尔埃博拉病毒的演变结果相比,2014年的病毒演变结果可以指导人们采取措施并制定适当的预防方案。比较和系统发生树方法能够揭示目前处理较为保守的进化程度。在ClustalX的帮助下,可以分析扎伊尔埃博拉病毒核苷酸序列不同部分的突变量。2014年的序列中只有3%的碱基发生了变化。系统发育树能反映不同年份序列的关系,具有同源性。结合碱基与相应氨基酸的变化,可以再次证明病毒的保守性。持续关注扎伊尔病毒非常重要,因为它可能有潜在的进化。
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