HMCS-G: grid-enabled hybrid computing system for computational astrophysics

T. Boku, M. Sato, K. Onuma, J. Makino, H. Susa, D. Takahashi, M. Umemura, A. Ukawa
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引用次数: 8

Abstract

The authors have developed a hybrid computing system called HMCS-G, a Grid-enabled Heterogeneous Multi-Computer System, that provides a multiple cluster environment centered around a dedicated machine for gravity calculation. The purpose of HMCS-G is to provide an ideal computational environment for astrophysical study involving multiple physical phenomena. The worker cluster may comprise general-purpose PCs to perform tasks such as hydrodynamics computations, while the special-purpose machine, in this case a GRAPE-6 cluster, performs gravity calculations for all pairs of particles in the system. These systems are connected by OmniRPC, a grid-enabled RPC system that supports Globus and ssh for authentication. HMCS-G effectively provides worldwide access to a GRAPE-6 cluster, thereby securing several TFLOPS performance for intensive computations such as gravity calculation. All participating PC-clusters share this resource in a time-based manner using grid technology. The actual turn-around response time was measured for a system implemented over a number of institutions, and it was confirmed that HMCS-G provides acceptable real-world application performance. Precise simulations of galaxy formation are currently being performed on clusters in several institutes, involving smoothed particle hydrodynamics and radiative transfer in the context of complete gravity calculation as the first real application of HMCS-G.
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HMCS-G:用于计算天体物理学的网格混合计算系统
作者开发了一种名为HMCS-G的混合计算系统,这是一种支持网格的异构多计算机系统,它提供了一个以专用机器为中心的多集群环境,用于重力计算。HMCS-G的目的是为涉及多种物理现象的天体物理研究提供一个理想的计算环境。工作集群可能包括通用pc来执行诸如流体力学计算之类的任务,而专用机器,在这种情况下是GRAPE-6集群,执行系统中所有粒子对的重力计算。这些系统通过OmniRPC连接起来,这是一个支持网格的RPC系统,支持Globus和ssh进行身份验证。HMCS-G有效地提供了对GRAPE-6集群的全球访问,从而确保了诸如重力计算等密集计算的若干TFLOPS性能。所有参与的pc集群使用网格技术以基于时间的方式共享此资源。测量了在多个机构上实现的系统的实际周转响应时间,并确认HMCS-G提供了可接受的实际应用程序性能。目前,一些研究机构正在对星系团进行星系形成的精确模拟,包括在完整重力计算背景下的平滑粒子流体动力学和辐射传输,这是HMCS-G的第一次实际应用。
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