Molecular Docking Analysis of PVDF Membrane Against Human Erα, EGFR, CDK2, mTOR, and HSP90 Proteins

Fatma Kubra Ata, Gülçin Özevci
{"title":"Molecular Docking Analysis of PVDF Membrane Against Human Erα, EGFR, CDK2, mTOR, and HSP90 Proteins","authors":"Fatma Kubra Ata, Gülçin Özevci","doi":"10.33793/acperpro.05.03.14021","DOIUrl":null,"url":null,"abstract":"Porous membranes are used in biological and chemical systems and industrial applications. Polyvinylidene fluoride film (PVDF) membrane is a commercial membrane used in drug delivery, protein immobilization, food industry, tissue engineering, and medical devices. Because of providing a large surface area in this study PVDF membrane is used. Molecular docking is a molecular modeling simulation software especially used to determine protein-ligand interactions. The aim of the study is to determine the interaction of hydrophobic PVDF membranes on Erα, EGFR, CDK2, mTOR, and HSP90 proteins by docking method and to examine its potential as a possible drug carrier. The three-dimensional structure of the receptors has been acquired from the RCSB protein data bank and is docked with 3D PubChem of PVDF using AutoDock 1.5.6 software. The results have shown that the PVDF membrane had the best docking score for mTOR between the investigated proteins.","PeriodicalId":207070,"journal":{"name":"Academic Perspective Procedia","volume":"144 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2022-11-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Academic Perspective Procedia","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.33793/acperpro.05.03.14021","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0

Abstract

Porous membranes are used in biological and chemical systems and industrial applications. Polyvinylidene fluoride film (PVDF) membrane is a commercial membrane used in drug delivery, protein immobilization, food industry, tissue engineering, and medical devices. Because of providing a large surface area in this study PVDF membrane is used. Molecular docking is a molecular modeling simulation software especially used to determine protein-ligand interactions. The aim of the study is to determine the interaction of hydrophobic PVDF membranes on Erα, EGFR, CDK2, mTOR, and HSP90 proteins by docking method and to examine its potential as a possible drug carrier. The three-dimensional structure of the receptors has been acquired from the RCSB protein data bank and is docked with 3D PubChem of PVDF using AutoDock 1.5.6 software. The results have shown that the PVDF membrane had the best docking score for mTOR between the investigated proteins.
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
PVDF膜抗人Erα、EGFR、CDK2、mTOR和HSP90蛋白的分子对接分析
多孔膜用于生物和化学系统以及工业应用。聚偏氟乙烯膜(PVDF)是一种商用膜,用于药物输送、蛋白质固定、食品工业、组织工程和医疗器械。由于在本研究中提供了较大的表面积,所以使用了PVDF膜。分子对接是一种分子建模仿真软件,特别用于确定蛋白质与配体的相互作用。本研究的目的是通过对接方法确定疏水性PVDF膜与Erα、EGFR、CDK2、mTOR和HSP90蛋白的相互作用,并研究其作为潜在药物载体的潜力。受体的三维结构已从RCSB蛋白数据库中获得,并使用AutoDock 1.5.6软件与PVDF的3D PubChem对接。结果表明,PVDF膜具有最佳的mTOR对接分数。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
自引率
0.00%
发文量
0
期刊最新文献
Çevre Dostu Flor Free Su İtici Tekstil Ürünlerinin Geliştirilmesi A Model Proposed For Sakarya Integrated Public Transportation System Through The Analysis Of Kahramanmaras And Kayseri Applications Güncel Bilgisayarlı Görme Teknikleri Kullanılarak Karın Bölgesi Hastalık Tespitinin Gerçekleştirilmesi ve Sonuçlarının Analizi Derin Öğrenme ile Deri Rahatsızlıklarının Erken Teşhisi için Bir Sistem Tasarımı Endüstriyel Tasarıma konu ürünlerin ticarileştirilmesinde NFT (Non- Fungible Token) kullanım potansiyeli
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1