Evaluation of MPI implementations on grid-connected clusters using an emulated WAN environment

Motohiko Matsuda, T. Kudoh, Y. Ishikawa
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引用次数: 41

Abstract

The MPICH-SCore high performance communication library for cluster computing is integrated into the MPICHG-2 library in order to adapt PC clusters to a Grid environment. The integrated library is called MPICH-G2/SCore. In addition, for the purpose of comparison with other approaches, MPICH-SCore itself is extended to encapsulate its network packet into a UDP packet so that packets are delivered via L3 switches. This extension is called UDP-encapsulated MPICH-SCore. In this paper, three implementations of the MPI library, UDP-encapsulated MPICH-SCore, MPICH-G2/SCore, and MPICH-P4, are evaluated using an emulated WAN environment where two clusters, each consisting of sixteen hosts, are connected by a router PC. The router PC controls the latency of message delivery between clusters, and the added latency is varied from I millisecond to 4 milliseconds in round-trip time. Experiments are performed using the NAS Parallel Benchmarks, which show UDP-encapsulated MPICH-SCore most often performs better than other implementations. However, the differences are not critical for the benchmarks. The preliminary results show that the performance of the LU benchmark scales up linearly with under 4 millisecond round-trip latency. The CG and MG benchmarks show the scalability of 1.13 and 1.24 times with 4 millisecond round-trip latency, respectively.
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使用模拟WAN环境对并网集群上的MPI实现进行评估
为了使PC集群适应网格环境,将用于集群计算的MPICH-SCore高性能通信库集成到MPICHG-2库中。集成库称为MPICH-G2/SCore。此外,为了与其他方法进行比较,对MPICH-SCore本身进行了扩展,将其网络报文封装成UDP报文,通过三层交换机发送。这个扩展称为udp封装的MPICH-SCore。在本文中,MPI库的三种实现,udp封装的MPICH-SCore, MPICH-G2/SCore和MPICH-P4,使用模拟WAN环境进行评估,其中两个集群,每个集群由16台主机组成,由路由器PC连接。路由器PC控制集群间消息传递的延迟,增加的延迟在往返时间上从1毫秒到4毫秒不等。使用NAS并行基准测试执行的实验表明,udp封装的MPICH-SCore通常比其他实现执行得更好。然而,这些差异对于基准测试来说并不重要。初步结果表明,LU基准测试的性能在4毫秒以下的往返延迟下呈线性增长。CG和MG基准测试分别显示可伸缩性为1.13倍和1.24倍,往返延迟为4毫秒。
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