Constructing Reliable Network Of Biomarker Covariance By Joint Data Harmonization And Graph Learning

Minjeong Kim, Guorong Wu
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Abstract

Networks of biomarker covariance based on neuropathological events or neuro-degeneration degree is important to understand genetic influence and trophic reinforcement in the brain development/aging process. It is a common to quantiry the covariance of inter-subject biomarker profiles by linear correlation metrics such as Pearson’s correlation. Due to the heterogeneity and noise in the observed neurobiological data, however, it is difficult to construct a reliable covariance network using gross statistical measurement. To this, we propose a graph learning approach to infer the brain connectivity based on the harmonized inter-subject biomarker profiles. Specifically, we progressively estimate brain network until region-to-region connectivities reach the largest consensus of biomarker covariance across individuals. A better understanding of the network topology allows us to harmonize the neurobiological data effectively which eventually facilitates the graph inference. Since the network of biomarker covariance represents the region-wise associations in the entire population, we further promote diversity by adaptively penalizing the predominant influence from a group of biomarker profiles exhibiting statistically correlated patterns. We applied our method to the cortical thickness from MRI and amyloid-beta burden from PET images, which are biomarkers in Alzheimer’s disease (AD). Enhanced statistical power and replicability have been achieved by our approach in identifying network alterations between cognitive normal (CN) and AD cohorts.
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联合数据协调和图学习构建可靠的生物标志物协方差网络
基于神经病理事件或神经退化程度的生物标志物协方差网络对于理解大脑发育/衰老过程中的遗传影响和营养强化非常重要。通过线性相关度量(如Pearson相关)来量化主体间生物标志物谱的协方差是一种常见的方法。然而,由于观察到的神经生物学数据存在异质性和噪声,使用粗统计测量难以构建可靠的协方差网络。为此,我们提出了一种基于协调的学科间生物标记谱来推断大脑连通性的图学习方法。具体来说,我们逐步估计大脑网络,直到区域到区域的连通性达到个体间生物标志物协方差的最大共识。更好地理解网络拓扑结构使我们能够有效地协调神经生物学数据,从而最终促进图推理。由于生物标记物协方差网络代表了整个种群的区域关联,因此我们通过自适应地惩罚一组显示统计相关模式的生物标记物谱的主要影响来进一步促进多样性。我们将我们的方法应用于MRI的皮质厚度和PET图像的淀粉样蛋白负荷,这是阿尔茨海默病(AD)的生物标志物。我们的方法在识别认知正常(CN)和AD队列之间的网络变化方面实现了增强的统计能力和可复制性。
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