Parallel processing of hybrid exact string matching algorithm

A. Abdulrazzaq, N. Rashid, Ayad Hussain Abdulkader Alezzi
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引用次数: 1

Abstract

The advancement of computer hardware has opened up new challenges to algorithms experts. One of the challenges is designing new algorithm that exploit the parallel nature of the new architecture of current computer hardware. In this study, we redesign the hybrid exact string matching algorithm named AKRAM on parallel platform with the goal of speeding up the algorithm. The parallel of this algorithm showed optimal results, in parallel time, speed up, efficiency and percentage of performance gain when compared to the sequential version. The result demonstrated that the performance of both parallelized and sequential of AKRAM algorithm was influenced by type of data. The DNA sequence showed the highest performance than other data types after parallelization.
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混合精确字符串匹配算法的并行处理
计算机硬件的进步给算法专家带来了新的挑战。其中一个挑战是设计新的算法,利用当前计算机硬件新架构的并行特性。在本研究中,我们在并行平台上重新设计了混合精确字符串匹配算法AKRAM,以提高算法的速度。与串行版本相比,该算法在并行时间、速度、效率和性能增益百分比方面都显示出最佳结果。结果表明,AKRAM算法的并行化和顺序化性能都受到数据类型的影响。DNA序列在并行化后表现出比其他数据类型最高的性能。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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