Parallel Optical Flow Processing of 4D Cardiac CT Data on Multicore Clusters

Xingfu Wu, G. Ding, V. Taylor
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引用次数: 1

Abstract

Optical flow is the distribution of apparent velocities of movement of brightness patterns in a sequence of images. For large 3D image sequences, optical flow applications are time consuming and memory-bound. To cope with these problems, in this paper, we present parallel optical flow processing of 4D cardiac CT data on multicore cluster systems to significantly shorten the time for computing velocity fields of the heart in order to aid cardiologists in diagnosing heart disease such as myocardial infarction and cardiac dysrhythmia in time. First, we modify and extend two traditional 2D optical flow methods Horn-Schunck and Lucas-Kanade to three-dimensional cases to process the 4D cardiac CT data. Second, we extend Mat lab MPI to support parallel computing with Mat lab and Octave on these cluster systems. Then we develop the parallel Mat lab/Octave optical flow applications for the 4D cardiac CT data in detail. Our experimental results show that these parallel optical flow applications have good scalability with close to linear speedup, and are able to shorten the image processing time significantly from more than 5 hours on 4 cores to 1.5 minutes on 1024 cores.
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多核簇上4D心脏CT数据的并行光流处理
光流是一组图像中亮度模式的视运动速度的分布。对于大型3D图像序列,光流应用程序耗时且内存受限。针对这些问题,本文在多核集群系统上对4D心脏CT数据进行并行光流处理,显著缩短心脏速度场的计算时间,从而帮助心脏科医师及时诊断心肌梗死、心律失常等心脏病。首先,我们对传统的二维光流方法Horn-Schunck和Lucas-Kanade进行改进和扩展,将其应用于三维病例,处理心脏CT四维数据。其次,我们扩展了Mat lab MPI,以支持Mat lab和Octave在这些集群系统上的并行计算。然后,我们详细开发了并行Mat lab/Octave光流在4D心脏CT数据中的应用。实验结果表明,这些并行光流应用具有良好的可扩展性和接近线性的加速,并且能够将图像处理时间从4核的5小时以上显著缩短到1024核的1.5分钟。
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