A Parallel Software Infrastructure for Structured Adaptive Mesh Methods

S. Kohn, S. Baden
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引用次数: 31

Abstract

Structured adaptive mesh algorithms dynamically allocate computational resources to accurately resolve interesting portions of a numerical calculation. Such methods are difficult to implement and parallelize because they rely on dynamic, irregular data structures. We have developed an efficient, portable, parallel software infrastructure for adaptive mesh methods; our software provides computational scientists with high-level facilities that hide low-level details of parallelism and resource management. We have applied our software infrastructure to the solution of adaptive eigenvalue problems arising in materials design. We describe our software infrastructure and analyze its performance. We also present computational results which indicate that the uniformity restrictions imposed by a data parallel Fortran implementation of a structured adaptive mesh application would significantly impact performance.
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结构化自适应网格方法的并行软件基础结构
结构化自适应网格算法动态分配计算资源,以准确地解决数值计算的有趣部分。这些方法很难实现和并行化,因为它们依赖于动态的、不规则的数据结构。我们已经为自适应网格方法开发了一个高效、可移植、并行的软件基础设施;我们的软件为计算科学家提供了高级设施,隐藏了并行性和资源管理的低级细节。我们已经将我们的软件基础设施应用于解决材料设计中出现的自适应特征值问题。我们描述了我们的软件基础结构并分析了它的性能。我们还提供了计算结果,表明结构化自适应网格应用程序的数据并行Fortran实现所施加的均匀性限制将显著影响性能。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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