Swin Transformer-Based Segmentation and Multi-Scale Feature Pyramid Fusion Module for Alzheimer's Disease with Machine Learning

Nasr Y. Gharaibeh, Ashraf A. Abu-Ein, Obaida M. Al-hazaimeh, K. M. Nahar, W. Abu-Ain, Malek M. Al-Nawashi
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引用次数: 1

Abstract

Alzheimer Disease (AD) is the ordinary type of dementia which does not have any proper and efficient medication. Accurate classification and detection of AD helps to diagnose AD in an earlier stage, for that purpose machine learning and deep learning techniques are used in AD detection which observers both normal and abnormal brain and accurately detect AD in an early. For accurate detection of AD, we proposed a novel approach for detecting AD using MRI images. The proposed work includes three processes such as tri-level pre-processing, swin transfer based segmentation, and multi-scale feature pyramid fusion module-based AD detection.In pre-processing, noises are removed from the MRI images using Hybrid Kuan Filter and Improved Frost Filter (HKIF) algorithm, skull stripping is performed by Geodesic Active Contour (GAC) algorithm which removes the non-brain tissues that increases detection accuracy. Here, bias field correction is performed by Expectation-Maximization (EM) algorithm which removes the intensity non-uniformity. After completed pre-processing, we initiate segmentation process using Swin Transformer based Segmentation using Modified U-Net and Generative Adversarial Network (ST-MUNet) algorithm which segments the gray matter, white matter, and cerebrospinal fluid from the brain images by considering cortical thickness, color, texture, and boundary information which increases segmentation accuracy. After that, multi-scale feature extraction is performed by Multi-Scale Feature Pyramid Fusion Module using VGG16 (MSFP-VGG16) which extract the features in multi-scale which increases the detection and classification accuracy, based on the extracted features the brain image is classified into three classes such as Alzheimer Disease (AD), Mild Cognitive Impairment, and Normal. The simulation of this research is conducted by Matlab R2020a simulation tool, and the performance of this research is evaluated by ADNI dataset in terms of accuracy, specificity, sensitivity, confusion matrix, and positive predictive value.  
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基于Swin变压器的阿尔茨海默病分割与多尺度特征金字塔融合模块
阿尔茨海默病(AD)是一种普通类型的痴呆症,没有任何适当和有效的药物。AD的准确分类和检测有助于AD的早期诊断,为此,机器学习和深度学习技术被用于AD的检测,它可以观察正常和异常的大脑,并在早期准确地发现AD。为了准确检测AD,我们提出了一种利用MRI图像检测AD的新方法。该算法包括三级预处理、基于swin迁移的分割和基于多尺度特征金字塔融合模块的AD检测三个过程。在预处理中,采用混合宽滤波和改进霜滤波(HKIF)算法去除MRI图像中的噪声,采用测地线活动轮廓(GAC)算法去除非脑组织,提高检测精度。本文采用期望最大化(EM)算法进行偏置场校正,消除了光强不均匀性。在完成预处理后,我们使用基于Swin Transformer的基于改进U-Net和生成对抗网络(ST-MUNet)算法的分割开始分割过程,该算法通过考虑皮质厚度,颜色,纹理和边界信息从脑图像中分割灰质,白质和脑脊液,从而提高分割精度。然后,利用VGG16 (MSFP-VGG16)多尺度特征金字塔融合模块进行多尺度特征提取,提取多尺度特征,提高检测和分类精度,根据提取的特征将脑图像分为阿尔茨海默病(AD)、轻度认知障碍(Mild Cognitive Impairment)和正常(Normal)三类。本研究通过Matlab R2020a仿真工具进行仿真,并通过ADNI数据集从准确性、特异性、灵敏度、混淆矩阵、阳性预测值等方面对本研究的性能进行评价。
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