{"title":"Stitched Multipanel Biomedical Figure Separation","authors":"K. Santosh, Sameer Kiran Antani, G. Thoma","doi":"10.1109/CBMS.2015.51","DOIUrl":null,"url":null,"abstract":"We present a novel technique to separate subpanels from stitched multipanel figures appearing in biomedical research articles. Since such figures may comprise images from different imaging modalities, separating them is a critical first step for effective biomedical content-based image retrieval (CBIR). The method applies local line segment detection based on the gray-level pixel changes. It then applies a line vectorization process that connects prominent broken lines along the subpanel boundaries while eliminating insignificant line segments within the subpanels. We have validated our fully automatic technique on a subset of stitched multipanel biomedical figures extracted from articles within the Open Access subset of PubMed Central repository, and have achieved precision and recall of 81.22% and 85.08%, respectively.","PeriodicalId":164356,"journal":{"name":"2015 IEEE 28th International Symposium on Computer-Based Medical Systems","volume":"64 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2015-06-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"16","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"2015 IEEE 28th International Symposium on Computer-Based Medical Systems","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1109/CBMS.2015.51","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 16
Abstract
We present a novel technique to separate subpanels from stitched multipanel figures appearing in biomedical research articles. Since such figures may comprise images from different imaging modalities, separating them is a critical first step for effective biomedical content-based image retrieval (CBIR). The method applies local line segment detection based on the gray-level pixel changes. It then applies a line vectorization process that connects prominent broken lines along the subpanel boundaries while eliminating insignificant line segments within the subpanels. We have validated our fully automatic technique on a subset of stitched multipanel biomedical figures extracted from articles within the Open Access subset of PubMed Central repository, and have achieved precision and recall of 81.22% and 85.08%, respectively.
我们提出了一种新技术,从出现在生物医学研究文章中的缝合多面板图中分离子面板。由于这些数字可能包含来自不同成像方式的图像,因此分离它们是有效的基于内容的生物医学图像检索(CBIR)的关键第一步。该方法基于灰度像素的变化进行局部线段检测。然后应用线矢量化过程,沿子面板边界连接突出的折线,同时消除子面板内不重要的线段。我们在PubMed Central repository的Open Access子集文章中提取的缝合多面板生物医学图形子集上验证了我们的全自动技术,准确率和召回率分别达到了81.22%和85.08%。