Raman spectrum classification and identification of COVID-19 based on RFE-RF

Xueyu Yang, Wandan Zeng, Min Wu
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Abstract

The Raman spectral data feature is generally the Raman wavelength of the sample, and there is a correlation between the feature attributes. Too many features will lead to weak generalization ability of the model, so a Recursive Feature Elimination (RFE) dimensionality reduction method combined with BP neural network is proposed to classify the Raman spectrum of the COVID-19. Firstly, the collected serum Raman spectral data of the population were processed, the maximum and minimum standard scaling method (Min-Max), the Savitzky-Golay smoothing filter method, and then the recursive feature elimination (RFE-RF) based on the random forest base model and two different dimensionality reduction methods of PCA reduce the dimensionality of Raman spectral data and classify them through the BP neural network algorithm model. The experimental results show that the RFE-RF dimensionality reduction method can improve the accuracy of the classification algorithm, providing a new idea for the detection of the COVID-19, with high accuracy, and the classification accuracy of the model is 92.47%
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基于RFE-RF的新型冠状病毒拉曼光谱分类与鉴定
拉曼光谱数据特征一般为样品的拉曼波长,特征属性之间存在相关性。针对特征过多会导致模型泛化能力弱的问题,提出了一种结合BP神经网络的递归特征消除(RFE)降维方法对COVID-19的拉曼光谱进行分类。首先对采集到的人群血清拉曼光谱数据进行处理,采用最大最小标准标度法(Min-Max)、Savitzky-Golay平滑滤波法,然后基于随机森林基模型和PCA的两种不同降维方法的递归特征消去法(RFE-RF)对拉曼光谱数据进行降维,并通过BP神经网络算法模型进行分类。实验结果表明,RFE-RF降维方法可以提高分类算法的准确率,为COVID-19的检测提供了新的思路,准确率较高,模型的分类准确率为92.47%
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