Sorting Intolerant from Tolerant and PolyPhen-2 Algorithms: A Variation in Exon 14 of ATP7B Gene among 4 West Iraqi Families with Wilson’s Disease

Omar Qahtan
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Abstract

Background: Wilson’s disease (WD) is a genetic disorder (autosomal recessive) that affects copper metabolism. A favorable prognosis for WD can be achieved with early diagnosis and treatment. It is also strongly advised to conduct a family screening. Objectives: To find the relationship between genotype and phenotype to facilitate the diagnosis of the disease as well as using modern methods in diagnosing WD. Materials and methods: This study included nine WD patients and fifteen healthy participants. Members of patients with WD and healthy members provided whole blood. Blood DNA was extracted, and Exon 14 was amplified using specific primers using polymerase chain reaction (PCR). The results of the PCR products were aligned to the published human genome database using the BLAST tool. Results: Three different variations have been recorded as a result of the experiment. All of the changes point to a deficiency in the ATP7B protein, which has been identified as a cause of WD. Conclusion: The ATP7B gene mutation spectrum in Iraqi patients has been enhanced as a result of our research, and this information could be used to develop gene therapy and clinical/prenatal diagnosis to prevent WD in Iraq.
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4个伊拉克西部威尔逊氏病家族ATP7B基因外显子14的变异
背景:威尔逊氏病(WD)是一种影响铜代谢的遗传疾病(常染色体隐性)。早期诊断和治疗WD可获得良好的预后。同时强烈建议进行家庭筛查。目的:探讨基因型与表型之间的关系,为该病的诊断提供依据,并利用现代诊断方法对该病进行诊断。材料和方法:本研究纳入9例WD患者和15例健康受试者。WD患者成员和健康成员提供全血。提取血液DNA,采用聚合酶链反应(PCR)扩增特异性引物外显子14。PCR产物的结果使用BLAST工具与已发表的人类基因组数据库进行比对。结果:实验记录了三种不同的变化。所有这些变化都指向ATP7B蛋白的缺乏,这被认为是导致WD的原因之一。结论:我们的研究增强了伊拉克患者ATP7B基因突变谱,这些信息可用于开发基因治疗和临床/产前诊断,以预防伊拉克WD。
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