F. Mansilla, P. Lamy, T. Ørntoft, K. Birkenkamp-Demtröder
{"title":"Genes Involved in Human Ribosome Biogenesis are Transcriptionally Upregulated in Colorectal Cancer","authors":"F. Mansilla, P. Lamy, T. Ørntoft, K. Birkenkamp-Demtröder","doi":"10.3814/2009/657042","DOIUrl":null,"url":null,"abstract":"Microarray gene expression profiling comprising 168 colorectal adenocarcinomas and 10 normal mucosas showed that over 79% of the genes involved in human ribosome biogenesis are significantly upregulated ( log 2 > 0.5 , p 10 − 3 ) when compared to normal mucosa. Overexpression was independent of microsatellite status. The promoters of the genes studied showed a significant enrichment for several transcription factor binding sites. There was a significant correlation between the number of binding site targets for these transcription factors and the observed gene transcript upregulation. The upregulation of rRNA processing genes points towards a coordinated process enabling the overproduction of matured ribosomal structures.","PeriodicalId":169134,"journal":{"name":"Scholarly Research Exchange","volume":"53 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2009-06-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"3","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Scholarly Research Exchange","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.3814/2009/657042","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 3
Abstract
Microarray gene expression profiling comprising 168 colorectal adenocarcinomas and 10 normal mucosas showed that over 79% of the genes involved in human ribosome biogenesis are significantly upregulated ( log 2 > 0.5 , p 10 − 3 ) when compared to normal mucosa. Overexpression was independent of microsatellite status. The promoters of the genes studied showed a significant enrichment for several transcription factor binding sites. There was a significant correlation between the number of binding site targets for these transcription factors and the observed gene transcript upregulation. The upregulation of rRNA processing genes points towards a coordinated process enabling the overproduction of matured ribosomal structures.