Binomial Distribution based K-means for Graph Partitioning Approach in Partially Reconfigurable Computing system

Zahra Asgari, Maryam Sadat Mastoori
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Abstract

Graph partitioning algorithms have been utilized to execute complex applications, where there is no enough space to run the whole application once, like in limited reconfigurable computing resources. If we have found an “optimal” clustering of a data set, it can be proved that optimal partitioning can be achieved. K-means based algorithms are widely used to partition subjects where there is no information about the number of clusters. A vital issue in the mentioned method is how to define a good centroid, which has the principal role in “good” clustering. In this paper, we introduced a new way to determine purposive centroids, based on Binomial Distribution to reduce the risk of randomly seeds selection, Elbow Diagram to achieve the optimum number of clusters, and finally, Bin Packing to classify nodes in defined clusters with considering Utilization Factor (UF) due to the limited area of Run Space. The proposed algorithm, called Binomial Distribution based K-means (BDK), is compared with common graph partitioning algorithms like Simulated Annealing Algorithm (SA), Density K-means (DK), and a link elimination partitioning with different scenarios such as simple and complex applications. The concluding results show that the proposed algorithm decreases the error of partitioning by 24% compared to the other clustering techniques. On the other hand, the Quality Factor (QF) is increased 41% in this way. Execution Time (EX.T) to achieve the required number of clusters is reduced significantly.
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部分可重构计算系统中基于二项分布的k均值图划分方法
图分区算法已被用于执行复杂的应用程序,在这些应用程序中,没有足够的空间来运行整个应用程序一次,比如在有限的可重构计算资源中。如果我们找到了一个数据集的“最优”聚类,就可以证明可以实现最优分区。基于K-means的算法被广泛用于划分没有集群数量信息的主题。在上述方法中,一个关键问题是如何定义一个好的质心,它在“好的”聚类中起着主要作用。本文引入了一种新的确定目的质心的方法,即基于二项分布来降低随机选择种子的风险,采用肘形图来实现最优簇数,最后采用Bin Packing方法在考虑运行空间有限的利用率(Utilization Factor, UF)的情况下对已定义簇中的节点进行分类。该算法被称为基于二项分布的K-means (BDK),并与常见的图划分算法(如模拟退火算法(SA)、密度K-means (DK)和链路消除划分)在简单和复杂应用等不同场景下进行了比较。结果表明,与其他聚类技术相比,该算法的分割误差降低了24%。另一方面,通过这种方式,质量因子(QF)提高了41%。实现所需集群数量的执行时间(EX.T)大大减少。
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