Systems biology platform for efficient development and translation of multitargeted therapeutics

Karim Azer, Irina Leaf
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Abstract

Failure to achieve efficacy is among the top, if not the most common reason for clinical trial failures. While there may be many underlying contributors to these failures, selecting the right mechanistic hypothesis, the right dose, or the right patient population are the main culprits. Systems biology is an inter-disciplinary field at the intersection of biology and mathematics that has the growing potential to increase probability of success in clinical trials, delivering a data-driven matching of the right mechanism to the right patient, at the right dose. Moreover, as part of successful selection of targets for a therapeutic area, systems biology is a prime approach to development of combination therapies to combating complex diseases, where single targets have failed to achieve sufficient efficacy in the clinic. Systems biology approaches have become increasingly powerful with the progress in molecular and computational methods and represent a novel innovative tool to tackle the complex mechanisms of human disease biology, linking it to clinical phenotypes and optimizing multiple steps of drug discovery and development. With increasing ability of probing biology at a cellular and organ level with omics technologies, systems biology is here to stay and is positioned to be one of the key pillars of drug discovery and development, predicting and advancing the best therapies that can be combined together for an optimal pharmacological effect in the clinic. Here we describe a systems biology platform with a stepwise approach that starts with characterization of the key pathways contributing to the Mechanism of Disease (MOD) and is followed by identification, design, optimization, and translation into the clinic of the best therapies that are able to reverse disease-related pathological mechanisms through one or multiple Mechanisms of Action (MOA).
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系统生物学平台的有效开发和翻译的多靶向治疗
未能达到疗效即使不是临床试验失败最常见的原因,也是最重要的原因之一。虽然可能有许多潜在的因素导致这些失败,但选择正确的机制假设、正确的剂量或正确的患者群体是主要的罪魁祸首。系统生物学是生物学和数学交叉的跨学科领域,在提高临床试验成功概率方面具有越来越大的潜力,在正确的剂量下为正确的患者提供正确的机制匹配数据。此外,作为成功选择治疗领域靶点的一部分,系统生物学是开发联合疗法以对抗复杂疾病的主要方法,其中单一靶点在临床中未能达到足够的疗效。随着分子和计算方法的进步,系统生物学方法变得越来越强大,代表了一种新的创新工具,可以解决人类疾病生物学的复杂机制,将其与临床表型联系起来,并优化药物发现和开发的多个步骤。随着组学技术在细胞和器官水平上探测生物学的能力不断增强,系统生物学将继续存在,并被定位为药物发现和开发的关键支柱之一,预测和推进最佳疗法,这些疗法可以结合在一起,在临床中产生最佳的药理效果。在这里,我们描述了一个系统生物学平台,采用逐步的方法,从对疾病机制(MOD)的关键途径的表征开始,然后是识别、设计、优化和转化为临床的最佳疗法,这些疗法能够通过一种或多种作用机制(MOA)逆转疾病相关的病理机制。
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