Genomic stability in Cenostigma Tul., (Caesalpinioideae, Fabaceae): causes and consequences

IF 4.6 Q2 MATERIALS SCIENCE, BIOMATERIALS ACS Applied Bio Materials Pub Date : 2023-08-25 DOI:10.1093/botlinnean/boad043
Natália Castro, Yennifer Mata-Sucre, Jefferson Carvalho-Sobrinho, André Marques, Rubens Teixeira de Queiroz, Gustavo Souza
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Abstract

Abstract The Pantropical Caesalpinia group includes 225 species distributed in 27 monophyletic genera, among which Cenostigma stands out by taxonomic and phylogenetic complexity. The genus includes trees and shrubs with interspecific hybridization and high diversity in north-eastern Brazil (Caatinga domain). Detailed cytogenomic characterizations have been performed only in C. microphyllum revealing enrichment of long terminal repeats (LTR) Ty3/gypsy transposable elements (TEs) and satellite DNA (satDNA) in the heterochromatin. Here, we aimed to perform a comparative analysis of seven Northeast Brazilian species of Cenostigma using cytogenomic and genomic approaches. The comparative genomic analysis revealed repeats stability with similar TE abundance, composition, and chromosomal localization in all species. On the other hand, satDNA were highly variable in abundance, in some cases species-specific. Cytogenomic data confirmed the karyotype stability with the TE elements Athila and Tekay enriching the proximal heterochromatin. Moreover, the satDNA CemiSat163 appeared to be exclusively located on acrocentric chromosomes of the analysed species. The genomic stability in Cenostigma may be related to their relatively recent age (~13.59 Mya), long-life cycle, and/ or similarity in ecological niche among this species. We propose that the genomic stability found in Cenostigma may facilitate the natural interspecific gene flow reported in sympatric species, complicating the interpretation of its systematics and evolution.
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小柱头(Cenostigma Tul)的基因组稳定性。(蚕豆科):原因与后果
泛热带凯撒属(Caesalpinia)共225种,分布于27个单系属,其中以新柱头(Cenostigma)的分类和系统发育复杂性最为突出。该属包括乔木和灌木,在巴西东北部(Caatinga域)具有种间杂交和高度多样性。详细的细胞基因组特征只在小叶C. microphyllum中进行,揭示了异染色质中长末端重复序列(LTR) Ty3/gypsy转座元件(TEs)和卫星DNA (satDNA)的富集。本文采用细胞基因组学和基因组学方法,对巴西东北部7种香柱头进行了比较分析。比较基因组分析显示,所有物种重复序列具有相似的TE丰度、组成和染色体定位的稳定性。另一方面,satDNA的丰度变化很大,在某些情况下是物种特异性的。细胞基因组数据证实了TE元素Athila和Tekay富集近端异染色质的核型稳定性。此外,satDNA CemiSat163似乎只位于所分析物种的顶心染色体上。新柱头基因组的稳定性可能与它们相对较晚的年龄(~13.59 Mya)、较长的生命周期和/或生态位相似有关。我们认为,在新柱头中发现的基因组稳定性可能促进了在同域物种中报道的自然种间基因流动,使其系统学和进化的解释复杂化。
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来源期刊
ACS Applied Bio Materials
ACS Applied Bio Materials Chemistry-Chemistry (all)
CiteScore
9.40
自引率
2.10%
发文量
464
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