Reconstructing bones: using statistical shape modelling to create 3D models of the femur from ultrasound images

Alex Mitton, Jonathan Noble, Adam Shortland
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Abstract

Many children with cerebral palsy (CP) develop bony deformities of the femur that require surgical intervention to correct1. Concerns regarding the radiation exposure from CT and the cost and scan time of MRI mean patient-specific 3D models of the femur are rarely used for surgical planning in this patient group, despite evidence supporting their role in improving surgical outcomes2,3,4. Ultrasound (US) imaging presents a cheap, low-risk, and readily available means of constructing such models. However, US is only able to capture partial views of the femur. The “missing” views may be reconstructed using statistical shape modelling; a mathematical technique used to quantitatively analyse complex shapes5,6. Can patient-specific 3D models of the femur be accurately reconstructed from partial surface data acquired with simulated 3D ultrasound using statistical shape modelling? 60 3D meshes of the femur were derived from MR images of 32 young adult subjects (13 with CP, 19 typically developing (TD)). The femur meshes from the left side were flipped horizontally to match those from the right. The meshes from both groups were then used to construct a statistical shape model (SSM) of the femur. An algorithm was written which used the SSM to reconstruct a complete femur mesh from partial information. To test the effectiveness of the algorithm, a dataset of partial surfaces replicating the views possible using US was created. Complete femurs were reconstructed from this dataset, and evaluated against the original 3D meshes using a leave-one-out cross validation procedure. An average point-to-point error of 1.16 ± 0.45 mm was found for reconstructions of the femurs from the TD group, compared to 2.55 ± 0.47 mm in the CP group. Fig. 1 – “a) Example partial surface from the simulated US dataset; b) Example TD reconstruction; c) Example CP reconstruction (reconstruction in purple, original mesh in white”)Download : Download high-res image (36KB)Download : Download full-size image The relatively low error for the reconstructions of the TD femurs demonstrates a promising proof of concept for the proposed technique of creating 3D femur models from partial surface data acquired with US. Future work may develop the algorithm further to improve its performance in the presence of increased femoral deformity, as found in the CP group. With development, this technique has the potential to bring the use of 3D models for preoperative planning into common practice for this patient group, which is likely to improve surgical outcomes. Although the focus of this study has been the creation of 3D models of the femur, the technique of reconstructing US images using statistical shape modelling could be applied to other anatomical structures. Owing to the reduced risk, cost and scan time compared with CT and MRI, the application of the proposed reconstruction technique has the potential to positively impact other surgical services.
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重建骨骼:利用统计形状建模从超声图像中创建股骨的3D模型
许多患有脑瘫(CP)的儿童会出现股骨骨畸形,需要手术干预来纠正。考虑到CT的辐射暴露以及MRI的成本和扫描时间,在该患者组中,患者特异性的股骨3D模型很少用于手术计划,尽管有证据支持它们在改善手术结果方面的作用2,3,4。超声(US)成像提供了一种廉价、低风险、容易获得的构建此类模型的方法。然而,US只能捕获股骨的部分视图。“缺失”的视图可以使用统计形状建模重建;一种用于定量分析复杂形状的数学技术。利用统计形状建模模拟三维超声获得的部分表面数据,能否准确重建患者特定的股骨三维模型?从32名年轻成人受试者(13名CP, 19名发育正常(TD))的MR图像中获得60个股骨三维网格。左侧的股骨网被水平翻转以匹配右侧的。然后使用两组的网格构建股骨的统计形状模型(SSM)。编写了一种利用SSM从部分信息重构完整股骨网格的算法。为了测试算法的有效性,我们创建了一个部分曲面的数据集,该数据集复制了使用US可能产生的视图。从该数据集重建完整的股骨,并使用留一交叉验证程序对原始3D网格进行评估。TD组重建股骨的平均点对点误差为1.16±0.45 mm,而CP组的平均点对点误差为2.55±0.47 mm。图1 - a)模拟美国数据集的局部地表样例;b)例TD重构;c)示例CP重建(重建为紫色,原始网格为白色)下载:下载高分辨率图像(36KB)下载:下载全尺寸图像TD股骨重建的相对较低的误差证明了利用US获取的部分表面数据创建3D股骨模型的拟议技术的概念证明。未来的工作可能会进一步发展该算法,以提高其在股骨畸形增加的情况下的性能,如在CP组中发现的那样。随着技术的发展,这项技术有可能将3D模型用于该患者群体的术前计划,这可能会改善手术结果。虽然本研究的重点是创建股骨的3D模型,但使用统计形状建模重建US图像的技术可以应用于其他解剖结构。由于与CT和MRI相比降低了风险、成本和扫描时间,因此所提出的重建技术的应用有可能对其他外科服务产生积极影响。
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