Integrating disparate survey data in species distribution models demonstrate the need for robust model evaluation

IF 1.9 2区 农林科学 Q2 FISHERIES Canadian Journal of Fisheries and Aquatic Sciences Pub Date : 2023-11-08 DOI:10.1139/cjfas-2022-0279
Jessica Nephin, Patrick L. Thompson, Sean C. Anderson, Ashley E. Park, Christopher N. Rooper, Brendan Aulthouse, Joe Watson
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Abstract

Marine spatial planning and conservation initiatives benefit from an understanding of species distributions across larger geographic areas than are often sampled by any one survey. Here, we test whether the integration of disparate survey data can improve habitat predictions across a region not well sampled by a single survey using Dungeness crab ( Metacarcinus magister) from British Columbia as a case study. We assemble data from dive, trawl, and baited-trap surveys to generate six candidate generalized linear mixed-effect models with spatial random fields. To compare single-survey and integrated models, we evaluate predictive performance with spatially buffered leave-one-out cross-validation and independently with two novel approaches using fisheries catch data. We find improved predictive performance and reduced uncertainty when integrating data from surveys that suffer from small sample size, low detectability, or limited spatial coverage. We demonstrate the importance of robust model evaluation when integrating data and predicting to unsampled locations. In addition, we highlight the need for careful consideration of sampling biases and model assumptions when integrating data to reduce the risk of prediction errors.
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在物种分布模型中整合不同的调查数据表明需要稳健的模型评估
海洋空间规划和保护举措得益于对更大地理区域物种分布的了解,而不是任何一次调查所取样的结果。在这里,我们以不列颠哥伦比亚省的Dungeness蟹(Metacarcinus magister)为例,测试了不同调查数据的整合是否可以改善单个调查中采样不足的地区的栖息地预测。我们收集了来自潜水、拖网和诱饵陷阱调查的数据,生成了六个候选的具有空间随机场的广义线性混合效应模型。为了比较单一调查模型和综合模型,我们使用空间缓冲留一交叉验证和两种使用渔业捕捞数据的新方法独立评估预测性能。我们发现,当整合来自样本量小、可探测性低或空间覆盖有限的调查数据时,预测性能得到改善,不确定性减少。我们证明了在整合数据和预测到未采样位置时鲁棒模型评估的重要性。此外,我们强调在整合数据时需要仔细考虑抽样偏差和模型假设,以减少预测误差的风险。
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来源期刊
Canadian Journal of Fisheries and Aquatic Sciences
Canadian Journal of Fisheries and Aquatic Sciences 农林科学-海洋与淡水生物学
CiteScore
4.60
自引率
12.50%
发文量
148
审稿时长
6-16 weeks
期刊介绍: The Canadian Journal of Fisheries and Aquatic Sciences is the primary publishing vehicle for the multidisciplinary field of aquatic sciences. It publishes perspectives (syntheses, critiques, and re-evaluations), discussions (comments and replies), articles, and rapid communications, relating to current research on -omics, cells, organisms, populations, ecosystems, or processes that affect aquatic systems. The journal seeks to amplify, modify, question, or redirect accumulated knowledge in the field of fisheries and aquatic science.
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