Evaluation of the Viral Diversity of Artemia Cysts from Saline Lakes in Kazakhstan Using Viral Metagenomics Analysis

IF 2.1 3区 农林科学 Q2 FISHERIES Fishes Pub Date : 2023-09-28 DOI:10.3390/fishes8100487
Marat Kumar, Kobey Karamendin, Zhanara Mazhibayeva, Yermukhammet Kassymbekov, Temirlan Sabyrzhan, Kuanysh Isbekov, Saule Assylbekova, Aidyn Kydyrmanov
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Abstract

Artemia (brine shrimp) holds significant value as a live feed for larval fish and crustaceans, owing to their distinctive dietary requirements. However, it is vital to acknowledge that Artemia also carries potential risk as a vector of infection. We conducted a metagenomic analysis to explore the virome present in Artemia cysts collected from inland salt lakes across four distinct regions in Kazakhstan. This study identified the presence of dsDNA phages and RNA virus sequences, with a predominant representation from the Reoviridae, Nodaviridae, Dicistroviridae, Picornaviridae, Astroviridae, Tombusviridae, and Solemoviridae families. In general, this study has significantly enhanced our understanding of the virome of Artemia cysts in the saline lakes of Kazakhstan; however, the interactions between these putative viruses and brine shrimp and other aquatic animals need further research.
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利用病毒宏基因组学分析评估哈萨克斯坦盐湖青蒿囊肿病毒多样性
由于其独特的饮食需求,Artemia(盐水虾)作为鱼类和甲壳类幼虫的活饲料具有重要价值。然而,至关重要的是要认识到青蒿素也具有作为感染媒介的潜在风险。我们进行了宏基因组分析,以探索从哈萨克斯坦四个不同地区的内陆盐湖收集的蒿囊中存在的病毒。本研究发现存在dsDNA噬菌体和RNA病毒序列,主要来自呼肠孤病毒科、noddaviridae、dicroroviridae、小核糖核酸病毒科、astrovirridae、tombusvirridae和solemovirridae家族。总的来说,这项研究大大提高了我们对哈萨克斯坦盐湖青蒿囊肿病毒的认识;然而,这些假定的病毒与盐水虾和其他水生动物之间的相互作用需要进一步研究。
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Fishes
Fishes Multiple-
CiteScore
1.90
自引率
8.70%
发文量
311
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