Analysis and experimental validation of the innate immune gene PSMD1 in liver hepatocellular carcinoma and pan-cancer

Xing Chen, Guihai Liu, Buqiang Wu
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Abstract

Abstract The aim of this study was to investigate the diagnostic, prognostic and biological role of PSMD1 in liver hepatocellular carcinoma(LIHC), an innate immune gene that has been identified as a biomarker for various types of cancer. Using The Cancer Genome Atlas (TCGA) data, we investigated the correlation of PSMD1 with overall survival (OS), prognosis and clinical characteristics of LIHC, its potential as a biomarker for LIHC, and validation using the Gene Expression Omnibus (GEO) data. Immunohistochemical and single-cell studies confirmed these findings and subsequently investigated its role in a variety of cancers. Results showed that PSMD1 was overexpressed in LIHC tissues and acted as an independent prognostic factor affecting patient survival, with effects on clinical traits reflected in advanced stage and T-stage. Genomic enrichment analysis revealed the regulation of synaptic signaling, organ development, cell membrane channel regulation and immune pathways by PSMD1. PSMD1 expression in LIHC was positively correlated with immune infiltration and involved multiple immune cells. Pan-cancer studies have shown that PSMD1 also has important research potential in various cancers. PSMD1 is a good biomarker for the diagnosis and prognosis of LIHC, and PSMD1 may contribute to the progression of LIHC through receptor ligand regulation and immune-related pathways.
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肝癌及泛癌中先天免疫基因PSMD1的分析及实验验证
摘要本研究的目的是探讨PSMD1在肝细胞癌(LIHC)中的诊断、预后和生物学作用,PSMD1是一种先天免疫基因,已被确定为多种类型癌症的生物标志物。利用癌症基因组图谱(TCGA)数据,我们研究了PSMD1与LIHC的总生存期(OS)、预后和临床特征的相关性,及其作为LIHC生物标志物的潜力,并利用基因表达综合(GEO)数据进行了验证。免疫组织化学和单细胞研究证实了这些发现,并随后调查了它在多种癌症中的作用。结果显示PSMD1在LIHC组织中过表达,是影响患者生存的独立预后因素,对临床特征的影响体现在晚期和t期。基因组富集分析显示PSMD1参与突触信号、器官发育、细胞膜通道调控和免疫途径的调控。PSMD1在LIHC中的表达与免疫浸润呈正相关,且涉及多个免疫细胞。泛癌症研究表明,PSMD1在各种癌症中也具有重要的研究潜力。PSMD1是LIHC诊断和预后的良好生物标志物,PSMD1可能通过受体配体调控和免疫相关途径参与LIHC的进展。
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