Multi-omics Analysis of Prognostic Significance and Immune Infiltration of FASTK Family Members in Kidney Renal Clear Cell Carcinoma.

IF 16.4 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Accounts of Chemical Research Pub Date : 2023-11-27 eCollection Date: 2023-01-01 DOI:10.1177/11769343231212078
Guanghui Zhong, Dali Wu, Haiping Chen, Lingfei Yan, Qi Xiang, Yufeng Liu, Tao Wang
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Abstract

Objective: The Fas-activated serine/threonine kinase (FASTK) family of proteins has been recently found to be able to regulate mitochondrial gene expression post-transcriptionally. Nonetheless, there is a paucity of study about the role of the FASTK family in kidney renal clear cell carcinoma (KIRC). This study was conducted to explore the correlation of FASTK family genes with expression, prognosis, and immune infiltration in KIRC.

Methods: We collected the data from the UALCAN, GeneMANIA, STRING, CancerSEA, cBioPortal, Kaplan-Meier plotter, GEPIA, TISIDB and TIMER databases to evaluate the genetic alterations, differential expression, prognostic significance, and immune cell infiltration of FASTKs in patients with KIRC.

Results: In tumor tissues of KIRC, the mRNA expression level of FASTK and TBRG4 was elevated, whereas that of FASTKD1, FASTKD2, and FASTKD5 was lowered compared with normal tissues (P < .05). Patients with KIRC and high FASTK and Transforming growth factor β regulator 4 (TBRG4) expression had worse overall survival (OS) and disease specific survival (DFS), while those with lower expression of FASTKD2/3/5 had worse outcomes. FASTK was positively correlated with DNA damage. FASTKD1 was positively related to differentiation. FASTKD2 was inversely related to proliferation and FASTKD5 was inversely related to invasion and EMT in KIRC cells. FASTK expression in KIRC was inversely linked to the presence of several immune cells including Tgd, macrophages, Tcm, and Mast cells (P < .05).

Conclusions: Our research provided fresh insight and in-depth analysis to the selection of prognostic biological markers of FASTK family members in KIRC.

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FASTK家族成员在肾透明细胞癌中的预后意义及免疫浸润的多组学分析。
目的:fas激活的丝氨酸/苏氨酸激酶(FASTK)蛋白家族最近被发现能够在转录后调节线粒体基因的表达。然而,关于FASTK家族在肾透明细胞癌(KIRC)中的作用的研究很少。本研究旨在探讨FASTK家族基因与KIRC的表达、预后及免疫浸润的相关性。方法:收集来自UALCAN、GeneMANIA、STRING、CancerSEA、cbiopportal、Kaplan-Meier plotter、GEPIA、TISIDB和TIMER数据库的数据,评估KIRC患者中FASTKs的遗传改变、差异表达、预后意义和免疫细胞浸润。结果:与正常组织相比,KIRC肿瘤组织中FASTK、TBRG4 mRNA表达水平升高,而FASTKD1、FASTKD2、FASTKD5 mRNA表达水平降低(P P)。结论:本研究为KIRC中FASTK家族成员预后生物学标志物的选择提供了新的见解和深入的分析。
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来源期刊
Accounts of Chemical Research
Accounts of Chemical Research 化学-化学综合
CiteScore
31.40
自引率
1.10%
发文量
312
审稿时长
2 months
期刊介绍: Accounts of Chemical Research presents short, concise and critical articles offering easy-to-read overviews of basic research and applications in all areas of chemistry and biochemistry. These short reviews focus on research from the author’s own laboratory and are designed to teach the reader about a research project. In addition, Accounts of Chemical Research publishes commentaries that give an informed opinion on a current research problem. Special Issues online are devoted to a single topic of unusual activity and significance. Accounts of Chemical Research replaces the traditional article abstract with an article "Conspectus." These entries synopsize the research affording the reader a closer look at the content and significance of an article. Through this provision of a more detailed description of the article contents, the Conspectus enhances the article's discoverability by search engines and the exposure for the research.
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