Integrating Different Data Sources Using a Bayesian Hierarchical Model to Unveil Glacial Refugia

IF 16.4 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Accounts of Chemical Research Pub Date : 2023-11-15 DOI:10.1007/s13253-023-00582-x
Mauricio Campos, Bo Li, Guillaume de Lafontaine, Joseph Napier, Feng Sheng Hu
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Abstract

Rapid anthropogenic climate change has elevated the interest in studying the biotic responses of species during the Last Glacial Maximum. During this period, species retreated to highly spatially restricted geographic regions where survival was possible, known as glacial micro-refugia, from which they migrated and expanded when conditions became more suitable. Several distinct sources of evidence have contributed to developing a new understanding of how these regions might have impacted the sustainability of the natural populations of many species. Pollen records in Eastern Beringia have been used to explore the possibility that the region harbored glacial refugia for several plants from the arctic tundra and/or the boreal forest biomes common to the region. Our study focuses on Alnus viridis and Picea glauca, two predominant species of arcto-boreal vegetation. We propose to integrate genomic, SDM, and existing fossil data in a hierarchical Bayesian modeling (HBM) framework to determine whether multiple refugia existed in isolated geographic areas. This study demonstrates how the flexibility of HBMs makes the formal synthesis of such disparate data sources feasible. Our results highlight the regions of plausible refugia that can guide future investigations into studying the role of glacial refugia during climate change. Supplementary materials accompanying this paper appear online.

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利用贝叶斯层次模型整合不同数据源揭示冰川避难所
快速的人为气候变化提高了人们对末次盛冰期物种生物响应研究的兴趣。在此期间,物种撤退到可能生存的空间高度受限的地理区域,被称为冰川微避难所,当条件变得更合适时,它们就会从那里迁移和扩张。几个不同的证据来源有助于对这些地区如何影响许多物种自然种群的可持续性产生新的理解。东白令陆桥的花粉记录被用来探索该地区是否有可能为来自北极苔原和/或该地区常见的北方森林生物群落的几种植物提供冰川避难所。本研究以绿桤木(Alnus viridis)和云杉(Picea glauca)为研究对象。我们建议将基因组、SDM和现有化石数据整合到一个层次贝叶斯模型(HBM)框架中,以确定在孤立的地理区域是否存在多个避难所。本研究展示了HBMs的灵活性如何使这种不同数据源的正式综合成为可能。我们的研究结果突出了可能的避难所区域,可以指导未来调查研究冰川避难所在气候变化中的作用。本文附带的补充资料出现在网上。
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来源期刊
Accounts of Chemical Research
Accounts of Chemical Research 化学-化学综合
CiteScore
31.40
自引率
1.10%
发文量
312
审稿时长
2 months
期刊介绍: Accounts of Chemical Research presents short, concise and critical articles offering easy-to-read overviews of basic research and applications in all areas of chemistry and biochemistry. These short reviews focus on research from the author’s own laboratory and are designed to teach the reader about a research project. In addition, Accounts of Chemical Research publishes commentaries that give an informed opinion on a current research problem. Special Issues online are devoted to a single topic of unusual activity and significance. Accounts of Chemical Research replaces the traditional article abstract with an article "Conspectus." These entries synopsize the research affording the reader a closer look at the content and significance of an article. Through this provision of a more detailed description of the article contents, the Conspectus enhances the article's discoverability by search engines and the exposure for the research.
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