{"title":"emgr – EMpirical GRamian Framework Version 5.99","authors":"Christian Himpe","doi":"https://dl.acm.org/doi/10.1145/3609860","DOIUrl":null,"url":null,"abstract":"<p>Version 5.99 of the empirical Gramian framework – <monospace>emgr</monospace> – completes a development cycle which focused on parametric model order reduction of gas network models while preserving compatibility to the previous development for the application of combined state and parameter reduction for neuroscience network models. Secondarily, new features concerning empirical Gramian types, perturbation design, and trajectory post-processing, as well as a Python version in addition to the default MATLAB / Octave implementation, have been added. This work summarizes these changes, particularly since <monospace>emgr</monospace> version 5.4, see <span>Himpe</span>, 2018 [Algorithms 11(7): 91], and gives recent as well as future applications, such as parameter identification in systems biology, based on the current feature set.</p>","PeriodicalId":50935,"journal":{"name":"ACM Transactions on Mathematical Software","volume":"2014 1","pages":""},"PeriodicalIF":2.7000,"publicationDate":"2023-07-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"ACM Transactions on Mathematical Software","FirstCategoryId":"94","ListUrlMain":"https://doi.org/https://dl.acm.org/doi/10.1145/3609860","RegionNum":1,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"COMPUTER SCIENCE, SOFTWARE ENGINEERING","Score":null,"Total":0}
引用次数: 0
Abstract
Version 5.99 of the empirical Gramian framework – emgr – completes a development cycle which focused on parametric model order reduction of gas network models while preserving compatibility to the previous development for the application of combined state and parameter reduction for neuroscience network models. Secondarily, new features concerning empirical Gramian types, perturbation design, and trajectory post-processing, as well as a Python version in addition to the default MATLAB / Octave implementation, have been added. This work summarizes these changes, particularly since emgr version 5.4, see Himpe, 2018 [Algorithms 11(7): 91], and gives recent as well as future applications, such as parameter identification in systems biology, based on the current feature set.
期刊介绍:
As a scientific journal, ACM Transactions on Mathematical Software (TOMS) documents the theoretical underpinnings of numeric, symbolic, algebraic, and geometric computing applications. It focuses on analysis and construction of algorithms and programs, and the interaction of programs and architecture. Algorithms documented in TOMS are available as the Collected Algorithms of the ACM at calgo.acm.org.