Transmembrane and Ubiquitin-Like Domain-Containing 1 Promotes Glioma Growth and Indicates Unfavorable Prognosis

IF 2.6 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY International Journal of Genomics Pub Date : 2023-12-19 DOI:10.1155/2023/3318171
Yinggang Liu, Changcheng Cai, Ke Wu, Libo Hu
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Abstract

Background. Ubiquitin-related proteins have garnered increasing attention for their roles in tumorigenesis. Transmembrane and ubiquitin-like domain-containing 1 (TMUB1) is a recently discovered protein in the ubiquitin-like domain family, yet its involvement in glioma remains poorly understood. This study is aimed at investigating the functional significance and clinical relevance of TMUB1 in glioma. Methods. We conducted a comprehensive analysis using two cohorts: a retrospective glioma cohort from our hospital and The Cancer Genome Atlas (TCGA) cohort. The mRNA levels of TMUB1 were assessed through reverse transcription-quantitative polymerase chain reaction (RT-qPCR). Clinical associations of TMUB1 in these cohorts were evaluated using correlation tests, chi-square tests, and survival analyses. Additionally, we performed TMUB1 knockdown in U87 and LN-229 human glioma cell lines, and cellular growth was assessed through the 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyl-2H-tetrazolium bromide (MTT) assay. Results. Our results revealed that TMUB1 expression was elevated in glioma tissues compared to normal brain tissues. Notably, lower TMUB1 expression correlated with favorable characteristics such as lower World Health Organization (WHO) grade and 1p/19q codeletion. Moreover, patients with higher TMUB1 levels in glioma tissues exhibited worse prognosis in both TCGA cohort and our retrospective cohort, underscoring its prognostic significance in gliomas. Cellular experiments demonstrated that TMUB1 silencing suppressed the growth of glioma cells. Conclusions. TMUB1 emerges as a novel and clinically relevant prognostic biomarker for gliomas. Targeting TMUB1 holds promise as a potential strategy for glioma treatment. This study contributes valuable insights into the multifaceted role of TMUB1 in glioma pathogenesis and its potential as a diagnostic and therapeutic target.
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含跨膜和泛素样域的 1 促进胶质瘤生长并预示不良预后
背景。泛素相关蛋白在肿瘤发生中的作用日益受到关注。跨膜和泛素样结构域1(TMUB1)是最近发现的泛素样结构域家族中的一种蛋白,但人们对它在胶质瘤中的参与仍知之甚少。本研究旨在探讨 TMUB1 在胶质瘤中的功能意义和临床相关性。方法。我们使用两个队列进行了综合分析:本医院的回顾性胶质瘤队列和癌症基因组图谱(TCGA)队列。我们通过反转录定量聚合酶链反应(RT-qPCR)评估了 TMUB1 的 mRNA 水平。我们使用相关性检验、卡方检验和生存分析评估了这些队列中 TMUB1 的临床相关性。此外,我们还在 U87 和 LN-229 人胶质瘤细胞系中敲除了 TMUB1,并通过 3-(4,5-二甲基噻唑-2-基)-2,5-二苯基-2H-溴化四氮唑(MTT)试验评估了细胞生长情况。结果我们的研究结果表明,与正常脑组织相比,胶质瘤组织中 TMUB1 的表达升高。值得注意的是,较低的TMUB1表达与较低的世界卫生组织(WHO)分级和1p/19q编码缺失等有利特征相关。此外,在TCGA队列和我们的回顾性队列中,胶质瘤组织中TMUB1水平较高的患者预后较差,这突显了TMUB1在胶质瘤中的预后意义。细胞实验表明,沉默 TMUB1 可抑制胶质瘤细胞的生长。结论:TMUB1TMUB1 是胶质瘤的一种新型临床相关预后生物标志物。以 TMUB1 为靶点有望成为治疗胶质瘤的潜在策略。这项研究有助于深入了解 TMUB1 在胶质瘤发病机制中的多方面作用及其作为诊断和治疗靶点的潜力。
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来源期刊
International Journal of Genomics
International Journal of Genomics BIOCHEMISTRY & MOLECULAR BIOLOGY-BIOTECHNOLOGY & APPLIED MICROBIOLOGY
CiteScore
5.40
自引率
0.00%
发文量
33
审稿时长
17 weeks
期刊介绍: International Journal of Genomics is a peer-reviewed, Open Access journal that publishes research articles as well as review articles in all areas of genome-scale analysis. Topics covered by the journal include, but are not limited to: bioinformatics, clinical genomics, disease genomics, epigenomics, evolutionary genomics, functional genomics, genome engineering, and synthetic genomics.
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