New nicotinamide derivatives as potential anticancer agents targeting VEGFR-2: design, synthesis, in vitro, and in silico studies.

IF 2.7 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Journal of Biomolecular Structure & Dynamics Pub Date : 2025-03-01 Epub Date: 2023-12-15 DOI:10.1080/07391102.2023.2294170
Reda G Yousef, Ibrahim H Eissa, Hazem Elkady, Wagdy M Eldehna, Ahmed B M Mehany, Ahmed Nabeeh, Ibrahim M Ibrahim, Alaa Elwan, Mohamed Ayman El-Zahabi
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Abstract

Herin, new nicotinamide candidates were designed and synthesized as VEGFR-2 inhibitors. In vitro antiproliferative activities were assessed against MCF-7, HepG-2 and HCT-116 cancer cell lines. The top cytotoxic members 15a, 15b, 16, 18a, and 18b were estimated against their selected target (VEGFR-2). Further mechanistic tests were studied for the most potent cytotoxic candidate 18a, these studies revealed the ability of compound 18a to hinder the progression of HCT-116 cells at S and Pre-G1phases besides boosting early and late apoptosis. Also compound 18a was found to significantly decrease the levels immunomodulatory proteins TNF-α and IL-6 while showing a four-fold rise in an apoptotic marker caspase-3 when compared to control cells. The therapeutic index of the designed derivatives was evaluated by computational ADMET and toxicity calculations as well as their potentiality to occupy the VEGFR-2 active site was signposted by molecular docking assessments. Finally, molecular dynamic simulation studies of compound 18a-VEGFR-2 complex indicated the high steadiness of compound 18a in the VEGFR-2 active site. This study presents compound 18a as a lead candidate that can be optimized to get a strong VEGFR-2 inhibitor.Communicated by Ramaswamy H. Sarma.

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作为靶向血管内皮生长因子受体-2 的潜在抗癌剂的新型烟酰胺衍生物:设计、合成、体外和硅学研究。
Herin 设计并合成了新的烟酰胺候选化合物作为 VEGFR-2 抑制剂。对 MCF-7、HepG-2 和 HCT-116 癌细胞株的体外抗增殖活性进行了评估。评估了 15a、15b、16、18a 和 18b 对所选靶标(VEGFR-2)的最高细胞毒性。这些研究表明,化合物 18a 除了能促进细胞早期和晚期凋亡外,还能阻碍 HCT-116 细胞在 S 期和前 G1 期的进展。研究还发现化合物 18a 能显著降低免疫调节蛋白 TNF-α 和 IL-6 的水平,同时与对照细胞相比,凋亡标志物 Caspase-3 的水平上升了四倍。通过计算 ADMET 和毒性计算评估了所设计衍生物的治疗指数,并通过分子对接评估确定了它们占据 VEGFR-2 活性位点的潜力。最后,对化合物 18a-VEGFR-2 复合物的分子动力学模拟研究表明,化合物 18a 在 VEGFR-2 活性位点的稳定性很高。这项研究将化合物 18a 作为一种候选先导化合物,通过优化可获得一种强效的 VEGFR-2 抑制剂。
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来源期刊
Journal of Biomolecular Structure & Dynamics
Journal of Biomolecular Structure & Dynamics 生物-生化与分子生物学
CiteScore
8.90
自引率
9.10%
发文量
597
审稿时长
2 months
期刊介绍: The Journal of Biomolecular Structure and Dynamics welcomes manuscripts on biological structure, dynamics, interactions and expression. The Journal is one of the leading publications in high end computational science, atomic structural biology, bioinformatics, virtual drug design, genomics and biological networks.
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