BioVitrina web repository — access to data on bioresource collections

Q3 Social Sciences Cardiovascular Therapy and Prevention Pub Date : 2023-12-10 DOI:10.15829/1728-8800-2023-3720

A. S. Bukreeva, K. Malsagova, A. A. Izotov, A. V. Lisitsa, A. L. Kaisheva

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引用次数: 0

Abstract

Aim. To develop the BioVitrina web repository for visualizing data on biological samples available in the organization (https://bb.ibmc.msk.ru).Material and methods. The following set of tools was used: PostgreSQL 12, Python 3.8 scripting language, Django 3.2.7, Angular 12.2.13, Nginx, Docker 3, Redis 6.Results. Biological samples are systematized according to the International Classification of Diseases, 10th revision (ICD-10). After selecting the most suitable biosamples, the User has the opportunity to submit a request for their receipt. A necessary condition for obtaining biological samples is the subsequent publication of the results of experimental studies in the BioVitrina web repository. Such an exchange of analytical research results will avoid repetition of similar studies and will contribute to the conservation of material resources.Conclusion. "BioVitrina" was developed to optimize the infrastructure of biobanks of organizations and ensure the availability of information about their existing bioresource collections. This will solve many issues related to the use of different types of biomaterials, both for research and clinical purposes in personalized biomedicine.

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BioVitrina 网络存储库--获取生物资源收藏数据

目的开发 BioVitrina 网络存储库，用于可视化组织内现有的生物样本数据（https://bb.ibmc.msk.ru）。材料与方法。使用了以下工具：PostgreSQL 12、Python 3.8 脚本语言、Django 3.2.7、Angular 12.2.13、Nginx、Docker 3、Redis 6。生物样本根据《国际疾病分类》第 10 版（ICD-10）进行系统分类。在选择了最合适的生物样本后，用户可以提交接收生物样本的申请。获得生物样本的一个必要条件是随后在 BioVitrina 网络存储库中公布实验研究结果。这种分析研究成果的交流将避免类似研究的重复，并有助于保护物质资源。开发 "BioVitrina "的目的是优化各组织生物库的基础设施，并确保其现有生物资源收藏信息的可用性。这将解决与使用不同类型的生物材料有关的许多问题，包括用于个性化生物医学的研究和临床目的。

本文章由计算机程序翻译，如有差异，请以英文原文为准。

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来源期刊

Cardiovascular Therapy and Prevention Medicine-Cardiology and Cardiovascular Medicine

CiteScore

1.70

自引率

0.00%

发文量

155

审稿时长

6-12 weeks

期刊介绍： The most important objectives of the journal are: the generalization of scientific and practical achievements in the field of cardiology, increasing scientific and practical skills of cardiologists. The scientific concept of publication does the publication of modern achievements in the field of epidemiology, prevention and treatment of cardiovascular diseases, the results of research, national and international clinical trials. For publication in the journal are invited both domestic and foreign scientists and clinicians working in the field of cardiology, as well as doctors of other specialties. The magazine covers various issues in cardiology and related specialties. Each issue is prepared by Executive editor of the issue, a respected specialist in the field of epidemiology, prevention and treatment of cardiovascular diseases. The main focus of the publication — scientific articles on original research, the pharmacotherapy of cardiovascular disease, new diagnostic methods. All members of the group of authors should meet all four criteria of authorship set forth in the ICMJE recommendations: 1) concept and design development or data analysis and interpretation, and 2) manuscript justification or verification of critical intellectual content, and 3) final approval for publication of the manuscript, and 4) consent to be responsible for all aspects of the work, and assume that issues relating to the thoroughness and diligent execution of any part of the study submitted are duly investigated and resolved. Great importance the editors attached to the preparation of scientific papers by groups of authors at a high level, literacy, authors, and their ownership information, availability of research results not only to colleagues in Russia, but also abroad.