Inventory and quality control of biosample collection from pregnant women at different gestational ages to search for early biomarkers of pregnancy complications

A. Maltseva, R. Illarionov, E. Vashukova, O. Pachulia, T. B. Postnikova, M. E. Velizhanina, A. Rubel, Y. Nasykhova, O. Bespalova, A. Glotov
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Abstract

Aim. To conduct an inventory and quality control of biosample collection from pregnant women at different gestational ages to search for early biomarkers of pregnancy complications.Material and methods. In this work, methods for assessing the sample preparation of biosamples were used, including the isolation of deoxyribonucleic acid (DNA)/ribonucleic acid from various biomaterials, polyacrylamide gel electrophoresis of protein, and database analysis.Results. Inventory and quality control of the collection (n=18390) was carried out, which confirmed the high safety of the biomaterial, regardless of storage period. The mean concentration of DNA was 69,96±6,56 ng/µl, extracellular DNA (ecDNA) — 0,20±0,02 ng/µl, ribonucleic acid — 38,16±5,69 ng/µl. DNA Integrity Number (DIN) >9, RNA integrity number (RIN) >7, A260/280 >1,8 were for all studied samples. Protein electrophoresis demonstrated no degradation of protein zones after longterm storage. The number of errors detected during the inventory was 84 (0,46% of all records in the database), while there were 64 donors with incomplete clinical information (15% of all donors in the collection).Conclusion. The necessity of mandatory implementation of standard operating procedures when creating and maintaining a collection, on the one hand, and periodic inventory with biosample quality assessment, on the other, has been demonstrated.
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为寻找妊娠并发症的早期生物标志物,对不同孕龄孕妇的生物样本采集进行清点和质量控制
目的对不同孕龄孕妇的生物样本采集进行清点和质量控制,以寻找妊娠并发症的早期生物标志物。在这项工作中,采用了评估生物样本制备的方法,包括从各种生物材料中分离脱氧核糖核酸(DNA)/核糖核酸、蛋白质的聚丙烯酰胺凝胶电泳和数据库分析。对收集到的生物材料(约 18390 份)进行了清点和质量控制,结果表明,无论储存时间长短,生物材料的安全性都很高。DNA的平均浓度为(69.96±6.56)纳克/微升,细胞外DNA(ecDNA)为(0.20±0.02)纳克/微升,核糖核酸为(38.16±5.69)纳克/微升。所有研究样本的 DNA 完整性指数 (DIN) >9,RNA 完整性指数 (RIN) >7,A260/280 >1.8。蛋白质电泳显示,长期储存后蛋白质区没有降解。在清点过程中发现的错误数量为 84 个(占数据库中所有记录的 0.46%),而临床信息不完整的捐献者有 64 名(占采集中所有捐献者的 15%)。结论:一方面,在创建和维护样本库时必须强制执行标准操作程序;另一方面,在进行生物样本质量评估时必须定期进行盘点。
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来源期刊
Cardiovascular Therapy and Prevention
Cardiovascular Therapy and Prevention Medicine-Cardiology and Cardiovascular Medicine
CiteScore
1.70
自引率
0.00%
发文量
155
审稿时长
6-12 weeks
期刊介绍: The most important objectives of the journal are: the generalization of scientific and practical achievements in the field of cardiology, increasing scientific and practical skills of cardiologists. The scientific concept of publication does the publication of modern achievements in the field of epidemiology, prevention and treatment of cardiovascular diseases, the results of research, national and international clinical trials. For publication in the journal are invited both domestic and foreign scientists and clinicians working in the field of cardiology, as well as doctors of other specialties. The magazine covers various issues in cardiology and related specialties. Each issue is prepared by Executive editor of the issue, a respected specialist in the field of epidemiology, prevention and treatment of cardiovascular diseases. The main focus of the publication — scientific articles on original research, the pharmacotherapy of cardiovascular disease, new diagnostic methods. All members of the group of authors should meet all four criteria of authorship set forth in the ICMJE recommendations: 1) concept and design development or data analysis and interpretation, and 2) manuscript justification or verification of critical intellectual content, and 3) final approval for publication of the manuscript, and 4) consent to be responsible for all aspects of the work, and assume that issues relating to the thoroughness and diligent execution of any part of the study submitted are duly investigated and resolved. Great importance the editors attached to the preparation of scientific papers by groups of authors at a high level, literacy, authors, and their ownership information, availability of research results not only to colleagues in Russia, but also abroad.
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