Bioinformatics Analyzes the Mechanisms of Codonopsis Radix in Treating Ovarian Cancer

IF 0.6 4区 医学 Q4 CHEMISTRY, MEDICINAL Pharmacognosy Magazine Pub Date : 2023-12-15 DOI:10.1177/09731296231204151
Zhenhui Chen, Yan Zhou, Yun Shen, Yanrong Ye
{"title":"Bioinformatics Analyzes the Mechanisms of Codonopsis Radix in Treating Ovarian Cancer","authors":"Zhenhui Chen, Yan Zhou, Yun Shen, Yanrong Ye","doi":"10.1177/09731296231204151","DOIUrl":null,"url":null,"abstract":"Codonopsis Radix (CR), a renowned traditional Chinese medicine (TCM) formula, has been widely applied for its immunomodulatory, antitumor, antioxidant, neuroprotective, and antiviral effects. However, the multitarget mechanism of CR in ovarian cancer (OC) remains to be elucidated. We applied bioinformatics and molecular docking techniques to explore possible pharmacological targets, bioactivities, and molecular mechanisms of CR for OC treatment. We identified 40 common genes associated with CR and OC and obtained core genes through a protein–protein interaction network. Enrichment analysis revealed that mitochondrial electron transport was the key biological process involved. Based on the analysis, we selected estrogen receptor 1 (ESR1) and phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha (PIK3CA) as the key target genes for molecular docking. In the final verification analysis, we evaluated the effect of the PIK3CA mutation on the survival rate of patients with OC and determined that the phosphoinositide 3-kinase/protein kinase B (PI3K/AKT) pathway was the key pathway in the OC treatment. These results suggest that CR inhibits the activity of mitochondrial complex II, reduces adenosine triphosphate (ATP) production by mitochondrial electron transport, inhibits PI3K/AKT phosphorylation, and promotes apoptosis in OC cells.","PeriodicalId":19895,"journal":{"name":"Pharmacognosy Magazine","volume":"11 21","pages":""},"PeriodicalIF":0.6000,"publicationDate":"2023-12-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Pharmacognosy Magazine","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.1177/09731296231204151","RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"CHEMISTRY, MEDICINAL","Score":null,"Total":0}
引用次数: 0

Abstract

Codonopsis Radix (CR), a renowned traditional Chinese medicine (TCM) formula, has been widely applied for its immunomodulatory, antitumor, antioxidant, neuroprotective, and antiviral effects. However, the multitarget mechanism of CR in ovarian cancer (OC) remains to be elucidated. We applied bioinformatics and molecular docking techniques to explore possible pharmacological targets, bioactivities, and molecular mechanisms of CR for OC treatment. We identified 40 common genes associated with CR and OC and obtained core genes through a protein–protein interaction network. Enrichment analysis revealed that mitochondrial electron transport was the key biological process involved. Based on the analysis, we selected estrogen receptor 1 (ESR1) and phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha (PIK3CA) as the key target genes for molecular docking. In the final verification analysis, we evaluated the effect of the PIK3CA mutation on the survival rate of patients with OC and determined that the phosphoinositide 3-kinase/protein kinase B (PI3K/AKT) pathway was the key pathway in the OC treatment. These results suggest that CR inhibits the activity of mitochondrial complex II, reduces adenosine triphosphate (ATP) production by mitochondrial electron transport, inhibits PI3K/AKT phosphorylation, and promotes apoptosis in OC cells.
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
生物信息学分析党参治疗卵巢癌的机制
党参(CR)是一种著名的传统中药配方,因其免疫调节、抗肿瘤、抗氧化、神经保护和抗病毒作用而被广泛应用。然而,CR在卵巢癌(OC)中的多靶点作用机制仍有待阐明。我们应用生物信息学和分子对接技术探索了 CR 治疗卵巢癌的可能药理靶点、生物活性和分子机制。我们确定了 40 个与 CR 和 OC 相关的常见基因,并通过蛋白相互作用网络获得了核心基因。富集分析表明,线粒体电子传递是所涉及的关键生物过程。根据分析结果,我们选择了雌激素受体 1(ESR1)和磷脂酰肌醇-4,5-二磷酸 3-激酶催化亚基α(PIK3CA)作为分子对接的关键目标基因。在最后的验证分析中,我们评估了 PIK3CA 突变对 OC 患者生存率的影响,并确定磷脂肌醇 3 激酶/蛋白激酶 B(PI3K/AKT)通路是 OC 治疗的关键通路。这些结果表明,CR能抑制线粒体复合体II的活性,减少线粒体电子传递产生的三磷酸腺苷(ATP),抑制PI3K/AKT磷酸化,促进OC细胞凋亡。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
Pharmacognosy Magazine
Pharmacognosy Magazine CHEMISTRY, MEDICINAL-
CiteScore
1.87
自引率
0.00%
发文量
37
审稿时长
3 months
期刊最新文献
Baicalin Promotes Apoptosis of Human Medullary Breast Cancer via the ERK/p38 MAPK Pathway Biological Control of Ustilaginoidea virens Using Chelerythrine Suspension A Review on Exploring the Phytochemical and Pharmacological Significance of Indigofera astragalina Calycosin Protects against Focal Cerebral Ischemia/Reperfusion Injury via Inhibiting the HMGB1/TLR4/NF-κB Signaling Pathway Mechanism of Schisandra chinensis in Treatment of Insomnia by Sleep–Wake Cycle Based on Network Pharmacology
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1