ZSCAN25 methylation predicts seizures and severe alcohol withdrawal syndrome.

IF 2.9 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Epigenetics Pub Date : 2024-12-01 Epub Date: 2024-01-03 DOI:10.1080/15592294.2023.2298057
Allan Andersen, Emily Milefchik, Emma Papworth, Brandan Penaluna, Kelsey Dawes, Joanna Moody, Gracie Weeks, Ellyse Froehlich, Kaitlyn deBlois, Jeffrey D Long, Robert Philibert
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Abstract

Currently, clinicians use their judgement and indices such as the Prediction of Alcohol Withdrawal Syndrome Scale (PAWSS) to determine whether patients are admitted to hospitals for consideration of withdrawal syndrome (AWS). However, only a fraction of those admitted will experience severe AWS. Previously, we and others have shown that epigenetic indices, such as the Alcohol T-Score (ATS), can quantify recent alcohol consumption. However, whether these or other alcohol biomarkers, such as carbohydrate deficient transferrin (CDT), could identify those at risk for severe AWS is unknown. To determine this, we first conducted genome-wide DNA methylation analyses of subjects entering and exiting alcohol treatment to identify loci whose methylation quickly reverted as a function of abstinence. We then tested whether methylation at a rapidly reverting locus, cg07375256, or other existing metrics including PAWSS scores, CDT levels, or ATS, could predict outcome in 125 subjects admitted for consideration of AWS. We found that PAWSS did not significantly predict severe AWS nor seizures. However, methylation at cg07375256 (ZSCAN25) and CDT strongly predicted severe AWS with ATS (p < 0.007) and cg07375256 (p < 6 × 10-5) methylation also predicting AWS associated seizures. We conclude that epigenetic methods can predict those likely to experience severe AWS and that the use of these or similar Precision Epigenetic approaches could better guide AWS management.

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ZSCAN25 甲基化可预测癫痫发作和严重酒精戒断综合征。
目前,临床医生根据自己的判断和酒精戒断综合征预测量表(PAWSS)等指标来决定患者是否因考虑戒断综合征(AWS)而入院。然而,只有一小部分入院患者会出现严重的戒断综合征。在此之前,我们和其他人已经证明,酒精T-评分(ATS)等表观遗传指数可以量化近期的酒精消耗量。然而,这些指标或其他酒精生物标志物(如碳水化合物缺乏性转铁蛋白(CDT))是否能识别有严重酒精中毒风险的人群尚不清楚。为了确定这一点,我们首先对进入和退出酒精治疗的受试者进行了全基因组 DNA 甲基化分析,以确定其甲基化随戒酒而迅速恢复的位点。然后,我们测试了快速甲基化位点 cg07375256 或其他现有指标(包括 PAWSS 评分、CDT 水平或 ATS)的甲基化是否能预测 125 名考虑接受 AWS 治疗的受试者的治疗结果。我们发现,PAWSS 并不能显著预测严重的 AWS 或癫痫发作。然而,cg07375256(ZSCAN25)和 CDT 的甲基化可强烈预测严重 AWS 和 ATS(P P
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来源期刊
Epigenetics
Epigenetics 生物-生化与分子生物学
CiteScore
6.80
自引率
2.70%
发文量
82
审稿时长
3-8 weeks
期刊介绍: Epigenetics publishes peer-reviewed original research and review articles that provide an unprecedented forum where epigenetic mechanisms and their role in diverse biological processes can be revealed, shared, and discussed. Epigenetics research studies heritable changes in gene expression caused by mechanisms others than the modification of the DNA sequence. Epigenetics therefore plays critical roles in a variety of biological systems, diseases, and disciplines. Topics of interest include (but are not limited to): DNA methylation Nucleosome positioning and modification Gene silencing Imprinting Nuclear reprogramming Chromatin remodeling Non-coding RNA Non-histone chromosomal elements Dosage compensation Nuclear organization Epigenetic therapy and diagnostics Nutrition and environmental epigenetics Cancer epigenetics Neuroepigenetics
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