Computational drug repurposing for viral infectious diseases: a case study on monkeypox.

IF 2.5 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Briefings in Functional Genomics Pub Date : 2024-09-27 DOI:10.1093/bfgp/elad058
Sovan Saha, Piyali Chatterjee, Mita Nasipuri, Subhadip Basu, Tapabrata Chakraborti
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Abstract

The traditional method of drug reuse or repurposing has significantly contributed to the identification of new antiviral compounds and therapeutic targets, enabling rapid response to developing infectious illnesses. This article presents an overview of how modern computational methods are used in drug repurposing for the treatment of viral infectious diseases. These methods utilize data sets that include reviewed information on the host's response to pathogens and drugs, as well as various connections such as gene expression patterns and protein-protein interaction networks. We assess the potential benefits and limitations of these methods by examining monkeypox as a specific example, but the knowledge acquired can be applied to other comparable disease scenarios.

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病毒性传染病的计算药物再利用:猴痘案例研究。
传统的药物重复使用或再利用方法极大地促进了新的抗病毒化合物和治疗靶点的确定,使人们能够对发展中的传染性疾病做出快速反应。本文概述了现代计算方法如何用于治疗病毒性传染病的药物再利用。这些方法利用的数据集包括宿主对病原体和药物反应的回顾信息,以及基因表达模式和蛋白质相互作用网络等各种联系。我们以猴痘为具体实例,评估了这些方法的潜在优势和局限性,但所获得的知识也可应用于其他类似的疾病情况。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Briefings in Functional Genomics
Briefings in Functional Genomics BIOTECHNOLOGY & APPLIED MICROBIOLOGY-GENETICS & HEREDITY
CiteScore
6.30
自引率
2.50%
发文量
37
审稿时长
6-12 weeks
期刊介绍: Briefings in Functional Genomics publishes high quality peer reviewed articles that focus on the use, development or exploitation of genomic approaches, and their application to all areas of biological research. As well as exploring thematic areas where these techniques and protocols are being used, articles review the impact that these approaches have had, or are likely to have, on their field. Subjects covered by the Journal include but are not restricted to: the identification and functional characterisation of coding and non-coding features in genomes, microarray technologies, gene expression profiling, next generation sequencing, pharmacogenomics, phenomics, SNP technologies, transgenic systems, mutation screens and genotyping. Articles range in scope and depth from the introductory level to specific details of protocols and analyses, encompassing bacterial, fungal, plant, animal and human data. The editorial board welcome the submission of review articles for publication. Essential criteria for the publication of papers is that they do not contain primary data, and that they are high quality, clearly written review articles which provide a balanced, highly informative and up to date perspective to researchers in the field of functional genomics.
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