RxNorm for drug name normalization: a case study of prescription opioids in the FDA adverse events reporting system

IF 2.8 Q2 MATHEMATICAL & COMPUTATIONAL BIOLOGY Frontiers in bioinformatics Pub Date : 2024-01-05 DOI:10.3389/fbinf.2023.1328613
Huyen Le, Ru Chen, Stephen Harris, Hong Fang, Beverly Lyn-Cook, H. Hong, W. Ge, Paul Rogers, Weida Tong, Wen Zou
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Abstract

Numerous studies have been conducted on the US Food and Drug Administration (FDA) Adverse Events Reporting System (FAERS) database to assess post-marketing reporting rates for drug safety review and risk assessment. However, the drug names in the adverse event (AE) reports from FAERS were heterogeneous due to a lack of uniformity of information submitted mandatorily by pharmaceutical companies and voluntarily by patients, healthcare professionals, and the public. Studies using FAERS and other spontaneous reporting AEs database without drug name normalization may encounter incomplete collection of AE reports from non-standard drug names and the accuracies of the results might be impacted. In this study, we demonstrated applicability of RxNorm, developed by the National Library of Medicine, for drug name normalization in FAERS. Using prescription opioids as a case study, we used RxNorm application program interface (API) to map all FDA-approved prescription opioids described in FAERS AE reports to their equivalent RxNorm Concept Unique Identifiers (RxCUIs) and RxNorm names. The different names of the opioids were then extracted, and their usage frequencies were calculated in collection of more than 14.9 million AE reports for 13 FDA-approved prescription opioid classes, reported over 17 years. The results showed that a significant number of different names were consistently used for opioids in FAERS reports, with 2,086 different names (out of 7,892) used at least three times and 842 different names used at least ten times for each of the 92 RxNorm names of FDA-approved opioids. Our method of using RxNorm API mapping was confirmed to be efficient and accurate and capable of reducing the heterogeneity of prescription opioid names significantly in the AE reports in FAERS; meanwhile, it is expected to have a broad application to different sets of drug names from any database where drug names are diverse and unnormalized. It is expected to be able to automatically standardize and link different representations of the same drugs to build an intact and high-quality database for diverse research, particularly postmarketing data analysis in pharmacovigilance initiatives.
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用于药品名称规范化的 RxNorm:FDA 不良事件报告系统中处方类阿片的案例研究
美国食品和药物管理局(FDA)的不良事件报告系统(FAERS)数据库已进行了大量研究,以评估上市后的报告率,用于药物安全性审查和风险评估。然而,由于制药公司强制提交的信息与患者、医疗保健专业人员和公众自愿提交的信息不统一,FAERS 中不良事件(AE)报告中的药物名称也不尽相同。使用 FAERS 和其他自发报告的 AEs 数据库进行研究时,如果没有对药物名称进行规范化处理,可能会遇到从非标准药物名称中收集到的 AE 报告不完整的问题,结果的准确性可能会受到影响。在本研究中,我们展示了美国国家医学图书馆开发的 RxNorm 在 FAERS 中进行药名规范化的适用性。以处方阿片类药物为例,我们使用 RxNorm 应用程序接口(API)将 FAERS AE 报告中描述的所有经 FDA 批准的处方阿片类药物映射为等效的 RxNorm 概念唯一标识符(RxCUI)和 RxNorm 名称。然后提取了阿片类药物的不同名称,并在收集的超过 1490 万份 AE 报告中计算了它们的使用频率,这些报告涉及 13 个 FDA 批准的处方阿片类药物类别,报告时间长达 17 年。结果显示,在 FAERS 报告中,阿片类药物持续使用了大量不同的名称,在 92 个 FDA 批准的阿片类药物 RxNorm 名称中,有 2,086 个不同名称(共 7,892 个)至少使用了三次,842 个不同名称至少使用了十次。我们使用 RxNorm API 映射的方法被证实是高效、准确的,能够显著减少 FAERS AE 报告中处方阿片类药物名称的异质性;同时,它有望广泛应用于任何药物名称多样且未规范化的数据库中的不同药物名称集。它有望能够自动标准化和连接相同药物的不同表述,从而建立一个完整和高质量的数据库,用于各种研究,特别是药物警戒计划中的上市后数据分析。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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