Loop-mediated isothermal amplification linked a nanoparticles-based biosensor for detecting Epstein-Barr virus.

IF 3.9 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Applied Microbiology and Biotechnology Pub Date : 2024-12-01 Epub Date: 2024-01-11 DOI:10.1007/s00253-023-12948-9
Xinggui Yang, Xiaoyan Zeng, Junfei Huang, Ludi Yang, Sha Mao, Xu Chen, Yu Wang, Xiaoyu Wei, Shijun Li
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Abstract

Epstein-Barr virus (EBV) is a ubiquitous gamma herpesvirus that maintains a lifelong latent association with B lymphocytes. Here, a rapid and reliable diagnosis platform for detecting EBV infection, employing loop-mediated isothermal amplification (LAMP) combined with a gold nanoparticles-based lateral flow biosensors (AuNPs-LFB) (termed LAMP Amplification Mediated AuNPs-LFB Detection, LAMAD), was developed in the current study. A set of specific LAMP primers targeting the Epstein-Barr nuclear antigen (EBNA) leader protein (EBNA-LP) gene was designed and synthesized. Subsequently, these templates extracted from various pathogens and whole blood samples were used to optimize and evaluate the EBV-LAMAD assay. As a result, the limit of detection (LoD) of the EBV-LAMAD assay was 45 copies/reaction. The EBV-LAMAD assay can detect all representative EBV pathogens used in the study, and of note, no cross-reactions were observed with other non-EBV organisms. Moreover, the whole workflow of the EBV-LAMAD assay can be completed within 70 min, including rapid EBV template preparation, EBV-LAMP amplification, and AuNPs-LFB-mediated detection. Taken together, the EBV-LAMAD assay targeting the EBNA-LP gene is a rapid, simplified, sensitive, reliable, and easy-to-use detection protocol that can be used as a competitive potential diagnostic/screening tool for EBV infection in clinical settings, especially in basic laboratories in resource-limited regions. KEY POINTS: • A novel, simplified, and easy-to-use AuNPs-LFB biosensor was designed and prepared. • LAMP combined with an AuNPs-LFB targeting the novel EBNA-LP gene was established. • EBV-LAMAD is a rapid, sensitive, and reliable detection protocol for EBV infection.

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环路介导等温扩增与基于纳米粒子的生物传感器相连,用于检测 Epstein-Barr 病毒。
爱泼斯坦-巴尔病毒(EBV)是一种无处不在的γ疱疹病毒,与B淋巴细胞保持终生潜伏关系。本研究采用环介导等温扩增(LAMP)技术,结合基于金纳米粒子的横向流动生物传感器(AuNPs-LFB)(称为 LAMP 扩增介导的 AuNPs-LFB 检测,LAMAD),开发了一种快速可靠的检测 EBV 感染的诊断平台。研究人员设计并合成了一套针对 Epstein-Barr 核抗原(EBNA)领导蛋白(EBNA-LP)基因的特异性 LAMP 引物。随后,这些从不同病原体和全血样本中提取的模板被用于优化和评估 EBV-LAMAD 检测方法。结果,EBV-LAMAD 检测法的检测限(LoD)为 45 个拷贝/反应。EBV-LAMAD 检测试剂盒可以检测研究中使用的所有代表性 EBV 病原体,而且没有发现与其他非 EBV 生物的交叉反应。此外,EBV-LAMAD 检测的整个工作流程可在 70 分钟内完成,包括快速 EBV 模板制备、EBV-LAMP 扩增和 AuNPs-LFB 介导的检测。综上所述,针对 EBNA-LP 基因的 EBV-LAMAD 检测是一种快速、简化、灵敏、可靠且易于使用的检测方案,可在临床环境中,尤其是在资源有限地区的基础实验室中作为一种有竞争力的潜在 EBV 感染诊断/筛查工具。要点:- 设计并制备了一种新颖、简化且易于使用的 AuNPs-LFB 生物传感器。- LAMP 与靶向新型 EBNA-LP 基因的 AuNPs-LFB 相结合。- EBV-LAMAD 是一种快速、灵敏、可靠的 EBV 感染检测方案。
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来源期刊
Applied Microbiology and Biotechnology
Applied Microbiology and Biotechnology 工程技术-生物工程与应用微生物
CiteScore
10.00
自引率
4.00%
发文量
535
审稿时长
2 months
期刊介绍: Applied Microbiology and Biotechnology focusses on prokaryotic or eukaryotic cells, relevant enzymes and proteins; applied genetics and molecular biotechnology; genomics and proteomics; applied microbial and cell physiology; environmental biotechnology; process and products and more. The journal welcomes full-length papers and mini-reviews of new and emerging products, processes and technologies.
期刊最新文献
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