Fluorescence Reporters turboGFP and turboRFP for Promoter Evaluation in Escherichia coli: Possibilities and Limitations

IF 1 4区 生物学 Q4 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Applied Biochemistry and Microbiology Pub Date : 2024-01-12 DOI:10.1134/S0003683823090107
K. V. Lavrov, E. G. Grechishnikova, A. O. Shemyakina, A. H. Bernal Mungarro, M. S. Potapova, D. D. Derbikov, A. S. Yanenko
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Abstract

Fluorescent proteins are convenient reporters widely used in cell biology. However, there is insufficient information at present on the possibilities and limitations of their use for the development and optimization of expression cassettes in the design of bacterial producers for biotechnology. Herein, the features of overexpression of genes of green (turboGFP) and red (turboRFP) fluorescent proteins in Escherichia coli under the control of the IPTG-regulated phage promoter T5 were investigated. Both proteins were mainly synthesized in the soluble form and had a significant cytotoxicity. In the presence of IPTG in the culture, overexpression of the turboGFP or turboRFP led to a delay in culture growth and the accumulation of clones that did not synthesize these proteins. Under the same cultivation conditions, the accumulation of such clones was more pronounced for turboRFP than for turboGFP. At a reduced expression level (in the absence of IPTG), these effects diminished (for turboRFP) or did not appear at all (for turboGFP). Possible reasons for the cytotoxicity of the studied proteins for E. coli cells were discussed. Practical recommendations for using the genes of investigated proteins as reporters in the development of expression cassettes were proposed. In particular, the level of production of the investigated proteins at which no negative effects were observed was determined, and the possibilities and limitations of the cytofluorometric cell sorting method in the development of strains-producers were indicated.

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用于大肠杆菌启动子评估的荧光报告基因 turboGFP 和 turboRFP:可能性与局限性
摘要荧光蛋白是细胞生物学中广泛使用的便捷报告物。然而,目前关于其在生物技术细菌生产者设计中用于开发和优化表达盒的可能性和局限性的信息还不够充分。本文研究了大肠杆菌在 IPTG 调节的噬菌体启动子 T5 控制下过量表达绿色(turboGFP)和红色(turboRFP)荧光蛋白基因的特点。这两种蛋白主要以可溶性形式合成,具有显著的细胞毒性。在培养基中存在 IPTG 的情况下,过量表达 turboGFP 或 turboRFP 会导致培养基生长延迟,并积累出不合成这些蛋白质的克隆。在相同的培养条件下,turboRFP 的克隆积累比 turboGFP 更明显。当表达水平降低时(在没有 IPTG 的情况下),这些效应减弱(对 turboRFP 而言)或完全不出现(对 turboGFP 而言)。讨论了所研究的蛋白质对大肠杆菌细胞具有细胞毒性的可能原因。提出了在开发表达盒时将所研究蛋白质的基因用作报告基因的实用建议。特别是,确定了观察到无负面影响的所研究蛋白质的生产水平,并指出了细胞荧光细胞分选法在开发菌株生产者方面的可能性和局限性。
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来源期刊
Applied Biochemistry and Microbiology
Applied Biochemistry and Microbiology 生物-生物工程与应用微生物
CiteScore
1.70
自引率
12.50%
发文量
75
审稿时长
6-12 weeks
期刊介绍: Applied Biochemistry and Microbiology is an international peer reviewed journal that publishes original articles on biochemistry and microbiology that have or may have practical applications. The studies include: enzymes and mechanisms of enzymatic reactions, biosynthesis of low and high molecular physiologically active compounds; the studies of their structure and properties; biogenesis and pathways of their regulation; metabolism of producers of biologically active compounds, biocatalysis in organic synthesis, applied genetics of microorganisms, applied enzymology; protein and metabolic engineering, biochemical bases of phytoimmunity, applied aspects of biochemical and immunochemical analysis; biodegradation of xenobiotics; biosensors; biomedical research (without clinical studies). Along with experimental works, the journal publishes descriptions of novel research techniques and reviews on selected topics.
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