Taking cues from machine learning, compartmental and time series models for SARS-CoV-2 omicron infection in Indian provinces

IF 1.7 Q3 PUBLIC, ENVIRONMENTAL & OCCUPATIONAL HEALTH Spatial and Spatio-Temporal Epidemiology Pub Date : 2024-02-01 Epub Date: 2024-01-18 DOI:10.1016/j.sste.2024.100634
Subhash Kumar Yadav , Saif Ali Khan , Mayank Tiwari , Arun Kumar , Vinit Kumar , Yusuf Akhter
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Abstract

SARS-CoV-2, the virus responsible for COVID-19, posed a significant threat to the world. We analyzed COVID-19 dissemination data in the top ten Indian provinces by infection incidences using the Susceptible-Infectious-Removed (SIR) model, an Autoregressive Integrated Moving Average (ARIMA) time series model, a machine learning model based on the Random Forest, and distribution fitting. Outbreaks are expected to continue if the Basic Reproduction Number (R0) > 1, and infection waves are anticipated to end if the R0 < 1, as determined by the SIR model. Different parametric probability distributions are also fitted. Data collected from December 12, 2021, to March 31, 2022, encompassing data from both before and during the implementation of strict control measures. Based on the estimates of the model parameters, health agencies and government policymakers can develop strategies to combat the spread of the disease in the future, and the most effective technique can be recommended for real-world application for other outbreaks of COVID-19. The best method out of these could be also implemented further on the epidemiological data of other similar infectious agents.

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印度各省 SARS-CoV-2 Omicron 感染的机器学习、区隔和时间序列模型的启示
SARS-CoV-2(COVID-19的致病病毒)对世界构成了重大威胁。我们利用易感-感染-移出(SIR)模型、自回归综合移动平均(ARIMA)时间序列模型、基于随机森林的机器学习模型和分布拟合,分析了印度感染发病率最高的十个省份的 COVID-19 传播数据。根据 SIR 模型,如果基本繁殖数(R0)为 1,则预计疫情将持续;如果 R0 为 1,则预计感染波将结束。还拟合了不同的参数概率分布。数据收集时间为 2021 年 12 月 12 日至 2022 年 3 月 31 日,包括严格控制措施实施前和实施期间的数据。根据对模型参数的估计,卫生机构和政府政策制定者可以制定未来抗击疾病传播的策略,并推荐最有效的技术用于实际应用。
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来源期刊
Spatial and Spatio-Temporal Epidemiology
Spatial and Spatio-Temporal Epidemiology PUBLIC, ENVIRONMENTAL & OCCUPATIONAL HEALTH-
CiteScore
5.10
自引率
8.80%
发文量
63
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