Complete Genome Resource of a Fungal Antagonistic Strain: Pseudomonas tohonis

Wan-Zhen Luo, Hengguang Zhu, Hong-Yue Qi, Jiangqing Song, Dan-Dan Zhang, X. Dai, Mai-He-Mu-Ti Mijiti, Jiemin Chen, Dongfei Han, Dan Wang
{"title":"Complete Genome Resource of a Fungal Antagonistic Strain: Pseudomonas tohonis","authors":"Wan-Zhen Luo, Hengguang Zhu, Hong-Yue Qi, Jiangqing Song, Dan-Dan Zhang, X. Dai, Mai-He-Mu-Ti Mijiti, Jiemin Chen, Dongfei Han, Dan Wang","doi":"10.1094/phytofr-09-23-0124-a","DOIUrl":null,"url":null,"abstract":"The KRS022 was isolated from the rhizosphere soil of a healthy plant in a pathogen-infested cotton field in Xinjiang, China. Previous studies have demonstrated that KRS022 possesses the ability to trigger plant immune responses, inhibit the growth of various pathogenic fungi, including Verticillium dahliae, and promote plant growth. The antagonistic properties of KRS022 primarily stem from its bioactive metabolites. In this study, the high-quality genome of KRS022 was obtained. The KRS022 genome consists of a chromosome of 6,369,026 bp with 67.09% GC content, possesses 5,830 ORFs, of which 5,186 genes were annotated, and 119 ncRNA genes. Additionally, eleven gene clusters of secondary metabolites biosynthesis were predicted, involving in PKS, arylpolyene, NAGGN, betalactone, ranthipeptide, RIPP-like, redox-cofactor, and NRPS clusters. It could be useful to explore the biocontrol potential of P. tohonis, implying promising application of KRS022 in biological control.","PeriodicalId":508090,"journal":{"name":"PhytoFrontiers™","volume":"46 21","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2024-01-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"PhytoFrontiers™","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1094/phytofr-09-23-0124-a","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0

Abstract

The KRS022 was isolated from the rhizosphere soil of a healthy plant in a pathogen-infested cotton field in Xinjiang, China. Previous studies have demonstrated that KRS022 possesses the ability to trigger plant immune responses, inhibit the growth of various pathogenic fungi, including Verticillium dahliae, and promote plant growth. The antagonistic properties of KRS022 primarily stem from its bioactive metabolites. In this study, the high-quality genome of KRS022 was obtained. The KRS022 genome consists of a chromosome of 6,369,026 bp with 67.09% GC content, possesses 5,830 ORFs, of which 5,186 genes were annotated, and 119 ncRNA genes. Additionally, eleven gene clusters of secondary metabolites biosynthesis were predicted, involving in PKS, arylpolyene, NAGGN, betalactone, ranthipeptide, RIPP-like, redox-cofactor, and NRPS clusters. It could be useful to explore the biocontrol potential of P. tohonis, implying promising application of KRS022 in biological control.
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
真菌拮抗菌株的完整基因组资源:陶氏假单胞菌
KRS022 是从中国新疆受病原菌侵染的棉田中一株健康植株的根瘤土壤中分离出来的。以往的研究表明,KRS022 具有触发植物免疫反应、抑制包括大丽轮枝菌在内的多种病原真菌生长和促进植物生长的能力。KRS022 的拮抗特性主要源于其生物活性代谢物。本研究获得了 KRS022 的高质量基因组。KRS022 基因组由一条长达 6,369,026 bp 的染色体组成,GC 含量为 67.09%,拥有 5,830 个 ORFs,其中 5,186 个基因已被注释,还有 119 个 ncRNA 基因。此外,还预测了 11 个次级代谢物生物合成基因簇,涉及 PKS、芳基聚烯、NAGGN、betalactone、ranthipeptide、RIPP-like、氧化还原因子和 NRPS 等基因簇。这对探索 P. tohonis 的生物防治潜力很有帮助,意味着 KRS022 在生物防治中的应用前景广阔。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
自引率
0.00%
发文量
0
期刊最新文献
Draft Genome Resource of a Wolbachia Endosymbiont in Heterodera humuli Unstable Transgene Expression Affects Long-Term Efficacy of the Arabidopsis Immune Receptor EFR to Confer Quantitative Resistance to Citrus Canker Under Field Conditions First complete genome sequence resource of a Lettuce mosaic virus isolate from the United States of America Effect of calcium propionate dip and spray applications on botrytis blight of ornamental plants A molecular method to assess viability of Phytophthora in infected wood following heat treatment
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1