Identification of potential antiviral compounds from Egyptian sea stars against seasonal influenza A/H1N1 virus

IF 3.5 Q3 Biochemistry, Genetics and Molecular Biology Journal of Genetic Engineering and Biotechnology Pub Date : 2024-01-22 DOI:10.1016/j.jgeb.2023.100334
Nadia I. Okasha , Mohamed Abdel Rahman , Mohammed S. Nafie , Noura M. Abo Shama , Ahmed Mostafa , Dalia A. El-Ebeedy , Ahmed Z. Abdel Azeiz
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Abstract

Background

One of the most dangerous problems that the world faced recently is viral respiratory pathogens. Marine creatures, including Echinodermata, specially Asteroidea class (starfish) have been extensively studied due to their miscellaneous bioactivities, excellent pharmacological properties, and complex secondary metabolites, including steroids, steroidal glycosides, anthraquinones, alkaloids, phospholipids, peptides, and fatty acids. These chemical constituents show antiviral activities against a wide range of viruses, including respiratory viruses.

Results

The present study aimed at the identification of potential antiviral compounds from some starfish species. The bioactive compounds from Pentaceraster cumingi, Astropecten polyacanthus, and Pentaceraster mammillatus were extracted using two different solvents (ethyl acetate and methanol). The antiviral activity against influenza A/H1N1 virus showed that ethyl acetate extract from Pentaceraster cumingi has the highest activity, where the selective index was 150.8. The bioactive compounds of this extract were identified by GC/MS analysis. The molecular docking study highlighted the virtual mechanism of binding of the identified compounds towards polymerase basic protein 2 and neuraminidase for H1N1 virus. Interestingly, linoleic acid showed promising binding energy of −10.12 Kcal/mol and −24.20 Kcal/mol for the selected two targets, respectively, and it formed good interactive modes with the key amino acids inside both proteins.

Conclusion

The molecular docking analysis showed that linoleic acid was the most active antiviral compound from P. cumingi. Further studies are recommended for in-vitro and in-vivo evaluation of this compound against influenza A/H1N1 virus.

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从埃及海星中鉴定抗季节性甲型 H1N1 流感病毒的潜在抗病毒化合物
背景 世界最近面临的最危险问题之一是病毒性呼吸道病原体。包括棘皮动物在内的海洋生物,尤其是海星类(Asteroidea),因其多种多样的生物活性、出色的药理特性以及复杂的次级代谢产物(包括类固醇、甾体苷、蒽醌、生物碱、磷脂、肽和脂肪酸)而被广泛研究。这些化学成分对包括呼吸道病毒在内的多种病毒具有抗病毒活性。使用两种不同的溶剂(乙酸乙酯和甲醇)从五棘海星(Pentaceraster cumingi)、多棘海星(Astropecten polyacanthus)和长棘海星(Pentaceraster mammillatus)中提取了生物活性化合物。对甲型 H1N1 流感病毒的抗病毒活性表明,积雪草乙酸乙酯提取物的活性最高,其选择指数为 150.8。GC/MS 分析鉴定了该提取物中的生物活性化合物。分子对接研究强调了已鉴定化合物与 H1N1 病毒聚合酶碱性蛋白 2 和神经氨酸酶的虚拟结合机制。有趣的是,亚油酸与所选的两个目标的结合能分别为 -10.12 Kcal/mol 和 -24.20 Kcal/mol,它与这两种蛋白质内部的关键氨基酸形成了良好的相互作用模式。建议进一步研究该化合物对甲型 H1N1 流感病毒的体外和体内评估。
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来源期刊
Journal of Genetic Engineering and Biotechnology
Journal of Genetic Engineering and Biotechnology Biochemistry, Genetics and Molecular Biology-Biotechnology
CiteScore
5.70
自引率
5.70%
发文量
159
审稿时长
16 weeks
期刊介绍: Journal of genetic engineering and biotechnology is devoted to rapid publication of full-length research papers that leads to significant contribution in advancing knowledge in genetic engineering and biotechnology and provide novel perspectives in this research area. JGEB includes all major themes related to genetic engineering and recombinant DNA. The area of interest of JGEB includes but not restricted to: •Plant genetics •Animal genetics •Bacterial enzymes •Agricultural Biotechnology, •Biochemistry, •Biophysics, •Bioinformatics, •Environmental Biotechnology, •Industrial Biotechnology, •Microbial biotechnology, •Medical Biotechnology, •Bioenergy, Biosafety, •Biosecurity, •Bioethics, •GMOS, •Genomic, •Proteomic JGEB accepts
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