Applying Findable, Accessible, Interoperable, and Reusable Principles to Biospecimens and Biobanks.

IF 1.6 4区 生物学 Biopreservation and Biobanking Pub Date : 2024-12-01 Epub Date: 2024-02-12 DOI:10.1089/bio.2023.0110
Amanda Rush, Jennifer A Byrne, Peter H Watson
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Abstract

The importance of stimulating greater sharing of data for use and reuse in health research is widely recognized. To this end, the findable, accessible, interoperable, and reusable (FAIR) principles for data have been developed and widely accepted in the research community. Research biospecimens are a resource that leads to much of this health research data but are also a form of data. Therefore, the FAIR principles should apply to biospecimens. Nevertheless, there is a widespread problem of not sharing biospecimen resources that is clearly visible within the research arena. The impacts of this are likely to include diversion of precious research funds into compiling duplicate biospecimen cohorts, detraction from research productivity as researchers compete for and create duplicate resources, and deterrence of attempts to assess research reproducibility. This article explores some of the barriers that may limit availability of FAIR biospecimens. These barriers relate to the type of biospecimen collections and the characteristics of the custodians that influence their intention and interest in sharing. Barriers also relate to the ethical, legal, and social issues concerning collections, the research context of the collections, and cost and expertise involved in repurposing collections to enable sharing. Several solutions to increase sharing are identified. Some have recently been implemented, including enhancing biospecimen locators with tools to guide researchers and facilitating transfer of research collections to centralized biobank infrastructures at the conclusion of projects. New proposed solutions include improving search capabilities within publication databases, and introduction of evidence-based justifications for all new collections into peer-reviewed grant competition processes. It is recognized that there are both scientific factors and practical reasons that can impose limits to sharing biospecimens. However, funding availability, productivity, and progress in health research all stand to benefit from improved sharing of research biospecimen collections.

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将可查找、可访问、可互操作和可重复使用原则应用于生物样本和生物库。
人们普遍认识到,在健康研究中促进更大程度的数据共享以便使用和重复使用非常重要。为此,研究界制定了可查找、可访问、可互操作和可重复使用(FAIR)的数据原则,并得到广泛认可。研究生物标本是一种资源,可产生许多健康研究数据,但也是一种数据形式。因此,FAIR 原则应适用于生物标本。然而,在研究领域,不共享生物样本资源的问题十分普遍。其影响可能包括:宝贵的研究经费被挪用于编制重复的生物样本队列;研究人员争夺和创造重复资源,降低了研究效率;以及阻碍了评估研究可重复性的尝试。本文探讨了可能限制 FAIR 生物样本可用性的一些障碍。这些障碍与生物样本采集的类型和保管人的特征有关,这些特征会影响保管人共享生物样本的意愿和兴趣。这些障碍还涉及与样本有关的伦理、法律和社会问题,样本的研究背景,以及重新利用样本以实现共享所涉及的成本和专业知识。我们提出了几种增加共享的解决方案。其中一些已于近期实施,包括利用各种工具加强生物样本定位器,为研究人员提供指导,以及在项目结束时促进研究藏品向中央生物库基础设施转移。新提出的解决方案包括改进出版物数据库的搜索功能,以及在同行评审的赠款竞争过程中引入所有新采集的循证理由。我们认识到,科学因素和实际原因都会对共享生物样本造成限制。不过,改善研究生物样本的共享,对资金的可用性、生产力和健康研究的进步都大有裨益。
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来源期刊
Biopreservation and Biobanking
Biopreservation and Biobanking Biochemistry, Genetics and Molecular Biology-General Biochemistry,Genetics and Molecular Biology
自引率
12.50%
发文量
114
期刊介绍: Biopreservation and Biobanking is the first journal to provide a unifying forum for the peer-reviewed communication of recent advances in the emerging and evolving field of biospecimen procurement, processing, preservation and banking, distribution, and use. The Journal publishes a range of original articles focusing on current challenges and problems in biopreservation, and advances in methods to address these issues related to the processing of macromolecules, cells, and tissues for research. In a new section dedicated to Emerging Markets and Technologies, the Journal highlights the emergence of new markets and technologies that are either adopting or disrupting the biobank framework as they imprint on society. The solutions presented here are anticipated to help drive innovation within the biobank community. Biopreservation and Biobanking also explores the ethical, legal, and societal considerations surrounding biobanking and biorepository operation. Ideas and practical solutions relevant to improved quality, efficiency, and sustainability of repositories, and relating to their management, operation and oversight are discussed as well.
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