Discrete network models of endothelial cells and their interactions with the substrate

IF 3 3区 医学 Q2 BIOPHYSICS Biomechanics and Modeling in Mechanobiology Pub Date : 2024-02-14 DOI:10.1007/s10237-023-01815-1
Raphael Jakob, Ben R. Britt, Costanza Giampietro, Edoardo Mazza, Alexander E. Ehret
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Abstract

Endothelial cell monolayers line the inner surfaces of blood and lymphatic vessels. They are continuously exposed to different mechanical loads, which may trigger mechanobiological signals and hence play a role in both physiological and pathological processes. Computer-based mechanical models of cells contribute to a better understanding of the relation between cell-scale loads and cues and the mechanical state of the hosting tissue. However, the confluency of the endothelial monolayer complicates these approaches since the intercellular cross-talk needs to be accounted for in addition to the cytoskeletal mechanics of the individual cells themselves. As a consequence, the computational approach must be able to efficiently model a large number of cells and their interaction. Here, we simulate cytoskeletal mechanics by means of molecular dynamics software, generally suitable to deal with large, locally interacting systems. Methods were developed to generate models of single cells and large monolayers with hundreds of cells. The single-cell model was considered for a comparison with experimental data. To this end, we simulated cell interactions with a continuous, deformable substrate, and computationally replicated multistep traction force microscopy experiments on endothelial cells. The results indicate that cell discrete network models are able to capture relevant features of the mechanical behaviour and are thus well-suited to investigate the mechanics of the large cytoskeletal network of individual cells and cell monolayers.

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内皮细胞及其与基质相互作用的离散网络模型。
内皮细胞单层排列在血管和淋巴管的内表面。它们持续暴露在不同的机械负荷下,这些负荷可能触发机械生物学信号,从而在生理和病理过程中发挥作用。基于计算机的细胞机械模型有助于更好地理解细胞尺度载荷和线索与所在组织的机械状态之间的关系。然而,内皮单层的汇合性使这些方法变得复杂,因为除了单个细胞本身的细胞骨架力学外,还需要考虑细胞间的交叉作用。因此,计算方法必须能够有效地模拟大量细胞及其相互作用。在此,我们通过分子动力学软件模拟细胞骨架力学,该软件通常适用于处理大型局部相互作用系统。我们开发了生成单细胞模型和包含数百个细胞的大单层模型的方法。单细胞模型用于与实验数据进行比较。为此,我们模拟了细胞与连续、可变形基底的相互作用,并通过计算复制了内皮细胞的多步牵引力显微镜实验。结果表明,细胞离散网络模型能够捕捉力学行为的相关特征,因此非常适合研究单个细胞和细胞单层的大型细胞骨架网络力学。
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来源期刊
Biomechanics and Modeling in Mechanobiology
Biomechanics and Modeling in Mechanobiology 工程技术-工程:生物医学
CiteScore
7.10
自引率
8.60%
发文量
119
审稿时长
6 months
期刊介绍: Mechanics regulates biological processes at the molecular, cellular, tissue, organ, and organism levels. A goal of this journal is to promote basic and applied research that integrates the expanding knowledge-bases in the allied fields of biomechanics and mechanobiology. Approaches may be experimental, theoretical, or computational; they may address phenomena at the nano, micro, or macrolevels. Of particular interest are investigations that (1) quantify the mechanical environment in which cells and matrix function in health, disease, or injury, (2) identify and quantify mechanosensitive responses and their mechanisms, (3) detail inter-relations between mechanics and biological processes such as growth, remodeling, adaptation, and repair, and (4) report discoveries that advance therapeutic and diagnostic procedures. Especially encouraged are analytical and computational models based on solid mechanics, fluid mechanics, or thermomechanics, and their interactions; also encouraged are reports of new experimental methods that expand measurement capabilities and new mathematical methods that facilitate analysis.
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