Nur Iriawan, A. A. Pravitasari, Ulfa S. Nuraini, Nur I. Nirmalasari, Taufik Azmi, Muhammad Nasrudin, Adam F. Fandisyah, K. Fithriasari, S. W. Purnami, Irhamah, Widiana Ferriastuti
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引用次数: 0
Abstract
Brain tumor detection and segmentation are the main issues in biomedical engineering research fields, and it is always challenging due to its heterogeneous shape and location in MRI. The quality of the MR images also plays an important role in providing a clear sight of the shape and boundary of the tumor. The clear shape and boundary of the tumor will increase the probability of safe medical surgery. Analysis of this different scope of image types requires refined computerized quantification and visualization tools. This paper employed deep learning to detect and segment brain tumor MRI images by combining the convolutional neural network (CNN) and fully convolutional network (FCN) methodology in serial. The fundamental finding is to detect and localize the tumor area with YOLO-CNN and segment it with the FCN-UNet architecture. This analysis provided automatic detection and segmentation as well as the location of the tumor. The segmentation using the UNet is run under four scenarios, and the best one is chosen by the minimum loss and maximum accuracy value. In this research, we used 277 images for training, 69 images for validation, and 14 images for testing. The validation is carried out by comparing the segmentation results with the medical ground truth to provide the correct classification ratio (CCR). This study succeeded in the detection of brain tumors and provided a clear area of the brain tumor with a high CCR of about 97%.
期刊介绍:
ACS Applied Bio Materials is an interdisciplinary journal publishing original research covering all aspects of biomaterials and biointerfaces including and beyond the traditional biosensing, biomedical and therapeutic applications.
The journal is devoted to reports of new and original experimental and theoretical research of an applied nature that integrates knowledge in the areas of materials, engineering, physics, bioscience, and chemistry into important bio applications. The journal is specifically interested in work that addresses the relationship between structure and function and assesses the stability and degradation of materials under relevant environmental and biological conditions.