Leonardo, Ade Firmansyah Sugiharto, Wresti Indriatmi, D. S. Atmadja, Ahmad Yudianto, Herkutanto, Wahyu Widodo
{"title":"DNA quality and quantity in adipose tissue: a comparison of the effects of bomb explosion","authors":"Leonardo, Ade Firmansyah Sugiharto, Wresti Indriatmi, D. S. Atmadja, Ahmad Yudianto, Herkutanto, Wahyu Widodo","doi":"10.13181/mji.oa.247206","DOIUrl":null,"url":null,"abstract":"BACKGROUND Adipose tissue is often overlooked in DNA testing due to misconceptions about its DNA content. However, its shock-absorbing qualities may be useful for high-pressure scenarios like bomb blasts. This study aimed to evaluate DNA quality and quantity in adipose tissue affected by blasts compared to that in unaffected tissue. \nMETHODS 10 adipose tissue samples were taken from regions near and far from the blast, representing the blast-exposed and non-blast-exposed groups. The adipose tissue was stored at a low temperature for 5 days, after which an organic extraction method was applied. The purity of the DNA extract was assessed using a NanoDrop spectrophotometer, and its integrity was evaluated using 0.8% concentration gel electrophoresis at 60 V for 90 min. DNA typing was conducted using the GlobalFiler™ kit, and DNA quantity was determined with the Quantifiler™ Trio DNA Quantification kit. \nRESULTS Of 20 DNA extracts from adipose tissue, all samples demonstrated purity, integrity, and complete typing results. Adequate integrity was found in 90% of samples in both groups. A 50% incidence of allele shifting was observed at the D7S820 locus within the blast-exposed group. \nCONCLUSIONS DNA from blast-exposed adipose tissue exhibited no significant quality or quantity differences from non-blast-exposed tissue. This suggested adipose tissue’s potential as an alternative DNA source in a bomb explosion.","PeriodicalId":506124,"journal":{"name":"Medical Journal of Indonesia","volume":"33 5","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2024-02-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Medical Journal of Indonesia","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.13181/mji.oa.247206","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
Abstract
BACKGROUND Adipose tissue is often overlooked in DNA testing due to misconceptions about its DNA content. However, its shock-absorbing qualities may be useful for high-pressure scenarios like bomb blasts. This study aimed to evaluate DNA quality and quantity in adipose tissue affected by blasts compared to that in unaffected tissue.
METHODS 10 adipose tissue samples were taken from regions near and far from the blast, representing the blast-exposed and non-blast-exposed groups. The adipose tissue was stored at a low temperature for 5 days, after which an organic extraction method was applied. The purity of the DNA extract was assessed using a NanoDrop spectrophotometer, and its integrity was evaluated using 0.8% concentration gel electrophoresis at 60 V for 90 min. DNA typing was conducted using the GlobalFiler™ kit, and DNA quantity was determined with the Quantifiler™ Trio DNA Quantification kit.
RESULTS Of 20 DNA extracts from adipose tissue, all samples demonstrated purity, integrity, and complete typing results. Adequate integrity was found in 90% of samples in both groups. A 50% incidence of allele shifting was observed at the D7S820 locus within the blast-exposed group.
CONCLUSIONS DNA from blast-exposed adipose tissue exhibited no significant quality or quantity differences from non-blast-exposed tissue. This suggested adipose tissue’s potential as an alternative DNA source in a bomb explosion.
背景由于对脂肪组织 DNA 含量的误解,脂肪组织在 DNA 检测中经常被忽视。然而,脂肪组织的吸震特性可能对炸弹爆炸等高压环境有用。本研究旨在评估与未受影响的组织相比,受爆炸影响的脂肪组织中 DNA 的质量和数量。方法 从距离爆炸地点较近和较远的区域各采集 10 个脂肪组织样本,分别代表受爆炸影响组和未受爆炸影响组。脂肪组织在低温下保存 5 天,然后采用有机提取法进行提取。DNA 提取物的纯度用 NanoDrop 分光光度计进行评估,其完整性用 0.8%浓度的凝胶电泳进行评估,电泳电压为 60 V,电泳时间为 90 分钟。使用 GlobalFiler™ 试剂盒进行 DNA 分型,使用 Quantifiler™ Trio DNA 定量试剂盒测定 DNA 数量。结果 在从脂肪组织提取的 20 份 DNA 样本中,所有样本都显示出纯度、完整性和完整的分型结果。两组中 90% 的样本都具有足够的完整性。在爆炸暴露组中,D7S820 位点的等位基因移位发生率为 50%。结论 受爆炸影响的脂肪组织的 DNA 在质量和数量上与未受爆炸影响的组织没有明显差异。这表明脂肪组织有可能成为炸弹爆炸中的另一种 DNA 来源。