Backbone cyclization of Salmonella typhimurium diaminopropionate ammonia-lyase to enhance the activity and stability

IF 1.4 4区 生物学 Q4 BIOCHEMICAL RESEARCH METHODS Protein expression and purification Pub Date : 2024-02-16 DOI:10.1016/j.pep.2024.106447
Xiaomei He , Tingting Lin , Yuying Xie , Jinjing Li , Yuanyuan Ge , Shuncheng Zhang , Jun Fan
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Abstract

Diaminopropionate ammonia-lyase transforms D and L isomers of 2,3-diaminopropionate to pyruvate and ammonia. It catalyzes D- and l-serine less effectively. L-2,3-diaminopropionate is a precursor in the biosynthesis of oxalyl diaminopropionate as a neurotoxin in certain legume species. In this work, we cyclized the diaminopropionate ammonia-lyase from Salmonella typhimurium in vitro using the redox-responsive split intein, and identified that backbone cyclization afforded the enzyme with the improved activity, thermal stability and resistance to the exopeptidase proteolysis, different from effects of the incorporated sequence recognized by tobacco vein mottling virus protease at C-terminus. Using analyses of three fluorescent dyes including 8-anilino-1-naphthalenesulfonic acid, N-phenyl-1-naphthylamine, and thioflavin T, the same amounts of the cyclic protein displayed less fluorescence than those of the linear protein upon the heat treatment. The cyclic enzyme displayed the enhanced activity in Escherichia coli cells using the designed novel reporter. In this system, d-serine was added to the culture and transported into the cytoplasm. It was transformed by pre-overexpression of the diaminopropionate ammonia-lyase, and untransformed d-serine was oxidized by the coproduced human d-amino acid oxidase to generate hydrogen peroxide. This oxidant is monitored by the HyPer indicator. The current results presented that the cyclized enzyme could be applied as a better candidate to block the neurotoxin biosynthesis in certain plant species.

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鼠伤寒沙门氏菌二氨基丙酸氨水解酶的骨架环化以提高其活性和稳定性。
二氨基丙酸氨水解酶可将 2,3-二氨基丙酸的 D 和 L 异构体转化为丙酮酸和氨。它催化 D-和 l-丝氨酸的效果较差。在某些豆科植物中,L-2,3-二氨基丙酸盐是草酰二氨基丙酸盐生物合成的前体,是一种神经毒素。在这项工作中,我们利用氧化还原反应分裂内含体在体外环化了鼠伤寒沙门氏菌的二氨基丙酸氨解酶,发现骨架环化使酶的活性、热稳定性和抗外肽酶蛋白水解的能力得到提高,这与烟草花叶病毒蛋白酶在 C 端识别的整合序列的效果不同。通过对 8-苯胺基-1-萘磺酸、N-苯基-1-萘胺和硫黄素 T 等三种荧光染料的分析,相同数量的环状蛋白在热处理后的荧光强度低于线性蛋白。利用所设计的新型报告物,环状酶在大肠杆菌细胞中显示出更强的活性。在该系统中,d-丝氨酸被添加到培养物中并被转运到细胞质中。通过预表达二氨基丙酸氨解酶对其进行转化,未转化的 d-丝氨酸被共同生产的人 d-氨基酸氧化酶氧化,生成过氧化氢。这种氧化剂由 HyPer 指示剂监测。目前的研究结果表明,环化酶可作为阻断某些植物物种神经毒素生物合成的更好候选酶。
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上海源叶 Purified recombinant yeast carboxypeptidase Y (CPY)
来源期刊
Protein expression and purification
Protein expression and purification 生物-生化研究方法
CiteScore
3.70
自引率
6.20%
发文量
120
审稿时长
32 days
期刊介绍: Protein Expression and Purification is an international journal providing a forum for the dissemination of new information on protein expression, extraction, purification, characterization, and/or applications using conventional biochemical and/or modern molecular biological approaches and methods, which are of broad interest to the field. The journal does not typically publish repetitive examples of protein expression and purification involving standard, well-established, methods. However, exceptions might include studies on important and/or difficult to express and/or purify proteins and/or studies that include extensive protein characterization, which provide new, previously unpublished information.
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