Genetic diversity and population structure of natural provenances of Sonneratia caseolaris in Vietnam

IF 3.5 Q3 Biochemistry, Genetics and Molecular Biology Journal of Genetic Engineering and Biotechnology Pub Date : 2024-02-23 DOI:10.1016/j.jgeb.2024.100356
Son Le , Thanh Van Le
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Abstract

Background

Sommeratia caseolaris is considered the most important mangrove species for reforestation and conservation programs. Therefore, the knowledge of genetic diversity and the population structure of the species has important implications both for the conservation of existing genetic resources and development programs. In the present study, the genetic diversity and structure population of eight populations of S. caseolaris from the Northern to the Southern Coast of Vietnam were determined using nine ISSR molecular markers.

Results

Eight populations of the mangrove species Sonneratia caseolaris were sampled across the natural range in Vietnam to evaluate the genetic diversity of the species. Nine ISSR markers were used to analyse 30 individuals from each population. There were moderate to high levels of genetic diversity (I = 0.447; h = 0.300). PCoA analysis gave very similar results to UPGMA dendrogram construction with the eight populations clustered into three genetic groups which mostly aligned with geographical distances among them. AMOVA analysis results indicated that most (81 %) of the genetic variation was within populations.

Conclusion

The current study also indicates the high level of genetic variation existing among and within the natural population of S. caseolaris in Vietnam. These results open new perspectives towards the conservation of the species' genetic resources and their future use in conservation and reforestation programs.

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越南 Sonneratia caseolaris 天然产地的遗传多样性和种群结构
背景Sommeratia caseolaris被认为是重新造林和保护计划中最重要的红树林物种。因此,了解该物种的遗传多样性和种群结构对现有遗传资源的保护和发展计划都具有重要意义。本研究使用 9 个 ISSR 分子标记测定了从越南北部到南部海岸的 8 个 S. caseolaris 种群的遗传多样性和种群结构。使用 9 个 ISSR 标记分析了每个种群的 30 个个体。遗传多样性达到了中高水平(I = 0.447;h = 0.300)。PCoA 分析的结果与 UPGMA 树枝图的构建结果非常相似,八个种群被聚类为三个遗传组,这些遗传组大多与它们之间的地理距离一致。AMOVA分析结果表明,大多数遗传变异(81%)发生在种群内部。这些结果为保护该物种的遗传资源及其未来在保护和重新造林计划中的应用开辟了新的前景。
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来源期刊
Journal of Genetic Engineering and Biotechnology
Journal of Genetic Engineering and Biotechnology Biochemistry, Genetics and Molecular Biology-Biotechnology
CiteScore
5.70
自引率
5.70%
发文量
159
审稿时长
16 weeks
期刊介绍: Journal of genetic engineering and biotechnology is devoted to rapid publication of full-length research papers that leads to significant contribution in advancing knowledge in genetic engineering and biotechnology and provide novel perspectives in this research area. JGEB includes all major themes related to genetic engineering and recombinant DNA. The area of interest of JGEB includes but not restricted to: •Plant genetics •Animal genetics •Bacterial enzymes •Agricultural Biotechnology, •Biochemistry, •Biophysics, •Bioinformatics, •Environmental Biotechnology, •Industrial Biotechnology, •Microbial biotechnology, •Medical Biotechnology, •Bioenergy, Biosafety, •Biosecurity, •Bioethics, •GMOS, •Genomic, •Proteomic JGEB accepts
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